Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso10g0546 | ATGGGCACAATGTTGGTGCCACCATGGCTTGAGCCACTCCTAAACACATCCTTCTTCAATGTGTGTCGGATTCACGGAGATGCCGCGAGGAGCGAATGTAACATGTTTTGTCTCGACTGCAATGAGAATGCGTTTTGCTTCTATTGCCGTTCCTCAAAACACAAGGATCACCAAGTCATTCAGATACGGAGATCTTCGTATCACGATGTAGTGAGGGTGGCGGAAATTCAGAAAGTGTTGGACATTAGTGGAGTTCAAACATATGTGATCAACAGTGCCAGAGTTTTGTTTCTGAATGAGAGGCCTCAACCAAAGTCTGGAAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGCTTCTGTTCTTTGGGGTGTAAGCTTGTAGGAATAAAGAGAAATGGGGATGCAAGTTTTACTTTGGATGCTAAAAATGAGGCATCAACAATGGAGGGTATGTCAAGGAGATCGGTTTCTTCAAGACATCATCAAGAAGAAGAATTGCGTGAAGGCTCACAACAAGACATGTACCCGGCCACACCTTCTCCACCTGCTTCAAACGCAAGGAGAAGAAAAGGGATTCCTCATAGGGCACCTTTTGGCTCCTAA | 627 | 0.4514 | MGTMLVPPWLEPLLNTSFFNVCRIHGDAARSECNMFCLDCNENAFCFYCRSSKHKDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGIKRNGDASFTLDAKNEASTMEGMSRRSVSSRHHQEEELREGSQQDMYPATPSPPASNARRRKGIPHRAPFGS* | 209 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso10g0546 | 208 | SMART | bboxneu5 | 17 | 62 | IPR000315 | GO:0008270 | |
Gso10g0546 | 208 | MobiDBLite | consensus disorder prediction | 162 | 178 | - | - | |
Gso10g0546 | 208 | Gene3D | Classic Zinc Finger | 17 | 81 | - | - | |
Gso10g0546 | 208 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 4 | 207 | - | - | |
Gso10g0546 | 208 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 4 | 207 | - | - | |
Gso10g0546 | 208 | Pfam | PLATZ transcription factor | 63 | 134 | IPR006734 | - | |
Gso10g0546 | 208 | MobiDBLite | consensus disorder prediction | 152 | 208 | - | - | |
Gso10g0546 | 208 | SUPERFAMILY | B-box zinc-binding domain | 19 | 64 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso10g0546 | Gso-Chr10 | 6120446 | 6122505 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | PLATZ | Gso10g0546 | PLATZ | 1e-29 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso10g0546 | - | - | gmx:100809455 | 433.335 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso19g1558 | 19 | 44550220 | 44552484 | Gso10g0546 | 10 | 6120446 | 6122505 | PCT | |
Gso3g1578 | 3 | 41745581 | 41747776 | Gso10g0546 | 10 | 6120446 | 6122505 | PCT | |
Gso10g0546 | 10 | 6120446 | 6122505 | Gso19g1558 | 19 | 44550220 | 44552484 | PCT | |
Gso10g0546 | 10 | 6120446 | 6122505 | Gso3g1578 | 3 | 41745581 | 41747776 | PCT |