Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0543 ATGTCTTCCTCACTCTCCCATCTCACACCTCTCTCTCTCTTCCTTCCCCGCAGACCCACCGTTTCCTCTCCCACTCCAAAACCTTATCGCTTCTCCGTCAAATCCTCCATCAACAAACCCCCCGACACCGGCACCGGCACCTCCAAGCCCAGCTCTTGGTTCAGCCCCGACTGGCTCACCTCCCTCTCCCGCTCCCTCGCCGCCGGCAACGACGACTCCGGCATTCCCCTCGCCTCCGCCAAGCTCGACGACGTCTCTGATCTCCTCGGCGGCGCGCTCTTCCTCCCTCTCTTCAAGTGGATGCAGGACTACGGCCCCATCTACCGCCTCGCCGCCGGCCCCCGAAACTTCGTCGTCGTTAGCGACCCCGCCATCGCCAAGCACGTGCTCAGGAACTACGGCAAATACGCCAAGGGTCTTGTTGCCGAGGTCTCCGAGTTCCTGTTTGGGTCCGGTTTCGCCATCGCCGAAGGTCCTCTCTGGACGGCAAGGCGCAGGGCTGTGGTTCCATCTCTTCATAAACGGTACTTGTCTGTTATAGTGGATAGGGTGTTTTGTAGATGTGCTGAGAGATTAGTGGAGAAGCTACAACCTGATGCACTTAATGGAACTGCTGTTAACATGGAGGCAAAGTTTTCGCAGTTGACTCTTGATGTTATTGGTTTATCTGTTTTTAATTATAACTTTGACTCGCTCAACATGGACAGTCCTGTTATTGAGGCTGTTTACACTGCATTAAAAGAGGCAGAGGCTCGATCAACTGATCTTTTACCGTATTGGAAGTTTAAATTTCTTTGTAAGATAATTCCGAGACAAATAACGGCTGAAGAGGCTGTTAGCATTATCAGGAAAACTGTTGAAGATCTTATTGAAAAGTGTAGAGAGATTGTAGAATCTGAGGGTGAAAGAATTGATGTCGAGGAATATGTGAATGACAGTGACCCTAGTATCCTTCGGTTCTTGCTTGCCAGCAGAGAAGAGGTTTCCAGTGTGCAATTAAGGGATGATCTTTTGTCACTATTAGTTGCTGGTCATGAGACCACCGGTTCAGTGCTGACCTGGACACTTTATCTTCTAAGCAAGGATTCTTCCTCATTGGCAAAAGCACAAGAAGAGGTAGACAGAGTTTTACAGGGAAGGCGACCTACCTATGAAGATATTAAAAATCTTAAGTTCTTGACACGCTGCATTATTGAGTCACTCCGTCTCTATCCACATCCTCCCGTATTGATAAGAAGAGCTCAAGTCCCGGATGAGCTTCCAGGTGGTTACAAACTCAATGCTGGTCAAGATATTATGATCTCTGTATACAACATACATCGTTCTTCTGAGGTCTGGGATAGGGCTGAAGAGTTTGCACCAGAAAGATTTGATTTGGATGGTCCAGTTCCAAATGAAACAAATACAGATTTCAGATTCATTCCATTCAGTGGAGGTCCCCGCAAATGTGTTGGTGATCAGTTTGCTTTAATGGAAGCTATAGTTGCTCTTGCAATCTTTCTACAGCACATGAACTTCGAACTAGTTCCTGATCAGAATGTCAGTATGACTACAGGAGCAACAATACATACAACAAATGGCTTGTACATGAAACTGAGCCGACGGTTGAAATAG 1614 0.4765 MSSSLSHLTPLSLFLPRRPTVSSPTPKPYRFSVKSSINKPPDTGTGTSKPSSWFSPDWLTSLSRSLAAGNDDSGIPLASAKLDDVSDLLGGALFLPLFKWMQDYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGKYAKGLVAEVSEFLFGSGFAIAEGPLWTARRRAVVPSLHKRYLSVIVDRVFCRCAERLVEKLQPDALNGTAVNMEAKFSQLTLDVIGLSVFNYNFDSLNMDSPVIEAVYTALKEAEARSTDLLPYWKFKFLCKIIPRQITAEEAVSIIRKTVEDLIEKCREIVESEGERIDVEEYVNDSDPSILRFLLASREEVSSVQLRDDLLSLLVAGHETTGSVLTWTLYLLSKDSSSLAKAQEEVDRVLQGRRPTYEDIKNLKFLTRCIIESLRLYPHPPVLIRRAQVPDELPGGYKLNAGQDIMISVYNIHRSSEVWDRAEEFAPERFDLDGPVPNETNTDFRFIPFSGGPRKCVGDQFALMEAIVALAIFLQHMNFELVPDQNVSMTTGATIHTTNGLYMKLSRRLK* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0543 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
Gso10g0543 537 SUPERFAMILY Cytochrome P450 89 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0543 537 PANTHER CAROTENE EPSILON-MONOOXYGENASE, CHLOROPLASTIC 113 535 - -
Gso10g0543 537 Gene3D Cytochrome P450 78 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0543 537 MobiDBLite consensus disorder prediction 25 51 - -
Gso10g0543 537 MobiDBLite consensus disorder prediction 19 51 - -
Gso10g0543 537 PANTHER CYTOCHROME P450 FAMILY 4 113 535 - -
Gso10g0543 537 Pfam Cytochrome P450 97 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0543 537 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0543 537 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0543 537 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0543 537 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0543 537 PRINTS E-class P450 group I signature 435 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0543 537 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0543 537 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0543 537 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0543 537 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0543 537 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0543 537 PRINTS P450 superfamily signature 483 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0543 Gso-Chr10 6078266 6084928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0543 23 535 Cytochrome P450 AT3G53130 82.330 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0543 K09837 - gmx:100797221 1051.58