Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0534 ATGGAGGATGCCAATGGAGGGGAAGCCGGGGAGAACGAAAGCCAACACGGAGGAGAAGAAGCCAGACGAGAAGAAACGAAGGGCGCGGAGGAAGAAGATGCCAGACGGGAAGCAAATTTGAAATGGAAGATTAGTGGGACAATCGACTATGCTACTTACTTTCTCAATCACACCTTTGCATCAACCAAGAATATGGAAGTTGAAATAATCTCCACTCAGTGCATCAAACCCTCTTGCACAACACCAAATCACCCAAATACATATAATCTCTCAATCTTAGACCAGTTCATGCCTTCTATATACATACCAATGGTTCTTTTCTACTCTTTTGCTCAGAGTTCTCAAGCCAATATTGACAGTACTATAACTCAACAAAGATTGAAACAATTAAAGGAATCATTATCACAAGTCTTGACTCATTTTTACCCATTCGCTGGAAGGGTTAAGGACAAGTTTACCATCGATTGCAATGATGAAGGGGTTCACTACACCGAGGCCAAAGTAAGTTGCACTCTAGCTGAATTTTTCAACCAACCTAATTTCTCGTCGCTTATCCATAAACTTGTTCCAAATCAACCAATTATGGAATTAGCGACCGAAGGGTACACAGCCATGGTACAAGTGAATTGTTTTGCATGTGGTGGCATGGTGATAGGTACCTTGATATCTCACATGATAGCGGATGGAGCAGGTGCAAGTTTCTTTTTAAATAGTTGGGGTTCTAATTCTAACTTTTCTCATCAAGATGCATTTGATCAATTTCCAAACTTTGATACCCCTTTCCCTCAGAATAATAATAATTATGCATGCCCACATGACACAAATGTGATGAATTTGTGTGGCCAATTTTTGAACGAGGGTAGGGTTGCTATGAGGAGGTTTTTATTTGATGCTGAAGCTATTTCGAGGTTAAGGGCTCAAGGGTCTAGTTTAACCGTGCAAAACCCTACTCGAGTGGAGGTAGTAACATCCCTTCTATGCAAATGTACTGCAAAAGTTTTCAATGCAAACTTTGGTTTAGAGAGGCCTACTTTGATAACTCATGCGGTAAATATGCGTAGAAGGGCATCTCCTATGTTTCCAAAATCGTGTATGGGTAATTTTGCATGGTTGGCTTTGGCTTTAATAATGAGTTCAAAGGACAACAAGGTAATAATGGAGTTATTACCTGACTTGGTTGTTAAATTGAGGGAAGCAGTGTCAAGTATCAACTCAGATTTTGTGAAAGGCTTCGAAGGTGATGAAGGGTATGCTAAATATTGTGAAGTTTCAAAAGAGTTAATTGAGAAAGCATCGAGTTTTGCTGCAACGACCACAAGTGGGGTTAATTACGTTCATTTTACGAGTTGGTGCAACTTTGGACTTTATGACGTTGATTATGGATGGGGAAAACCAATTTGGGTGTCTTGTGTGGCTGATTCAGTTGACGATTCTATGTTTTTTAACGCGGTCATACTAATGGATACACCTTCAGGAAATGGAATTGAATGTTGGGTTTACTTGAATGAAGATGAAATGGCCATATTGCAACAAGACAAGGAGCTCCTTGCTTTTTCAACCTTAGATCCAAATCCTCAGCAACTAAAGGATTAA 1593 0.3999 MEDANGGEAGENESQHGGEEARREETKGAEEEDARREANLKWKISGTIDYATYFLNHTFASTKNMEVEIISTQCIKPSCTTPNHPNTYNLSILDQFMPSIYIPMVLFYSFAQSSQANIDSTITQQRLKQLKESLSQVLTHFYPFAGRVKDKFTIDCNDEGVHYTEAKVSCTLAEFFNQPNFSSLIHKLVPNQPIMELATEGYTAMVQVNCFACGGMVIGTLISHMIADGAGASFFLNSWGSNSNFSHQDAFDQFPNFDTPFPQNNNNYACPHDTNVMNLCGQFLNEGRVAMRRFLFDAEAISRLRAQGSSLTVQNPTRVEVVTSLLCKCTAKVFNANFGLERPTLITHAVNMRRRASPMFPKSCMGNFAWLALALIMSSKDNKVIMELLPDLVVKLREAVSSINSDFVKGFEGDEGYAKYCEVSKELIEKASSFAATTTSGVNYVHFTSWCNFGLYDVDYGWGKPIWVSCVADSVDDSMFFNAVILMDTPSGNGIECWVYLNEDEMAILQQDKELLAFSTLDPNPQQLKD* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0534 530 MobiDBLite consensus disorder prediction 13 36 - -
Gso10g0534 530 Gene3D - 63 269 IPR023213 -
Gso10g0534 530 MobiDBLite consensus disorder prediction 1 36 - -
Gso10g0534 530 PANTHER F21J9.9 66 527 - -
Gso10g0534 530 Pfam Transferase family 65 515 - -
Gso10g0534 530 PANTHER VINORINE SYNTHASE-LIKE 66 527 - -
Gso10g0534 530 Gene3D - 288 519 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0534 Gso-Chr10 5940299 5943847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0534 65 511 Monolignol Biosynthesis Gene Families AT5G48930 21.656 3.11e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0534 - - gmx:100792475 1076.62