LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso10g0531	ATGTCTGAACGAGCGGATATGAATTATGAAAATGTAGAATCATGTGGTGCGAATGAACCACATGTTGATTGTTCGGATGCATTCAAGACTTCTCAAGTGTTTGAGTGCCGAGAGGATGTTTTGCGGTCGGACACAAACACAGGTAGTAGAGGAAGGAGTACATTTGTGTTAATTGGTTGTGAAAGGAGTGGCGAGTATAAGTGTAGGAAAAAAGAATTTATCAGAAGAGACACTGGGACTAGGAAATGTGGGTGTCCCTTCAAGCTTCGTTGCAAGCCAATGGTTGGAGGAGAAGGCTGGATGGTGAAGTTGATTTGTGGAGTGCATAATCATGAATTGGCCAAGTCATTAGTTGGATATCCATATGCGGGACAATTGACTAAAGCTGAAAAAACACTTATTGCTGATATGGCGAAGTCCATGGTGAAGCCAAGAAACATTCTGCTAACTCTGAAGGAACACAATGCCAATAGCTGTACGACTATTAAACAGATATACAATGCAAGAAGTGCATTCTGTTCTTCCATAAGAGGAAGCGATCTTGAAATGCAACATCTGATGAAGCTTCTTGAACACTCTTGGTCGATGGTCCACAGCCATCTGCGTAAAGAACTTGCCAATTTCTCAGAAGACTATATCAAGCTCTTTGGTGGCACGGAGAGATTTGAGGAATTAAGGATGTCACTACTTGTTGATGGGTTAACCAAGGTGACAATGGATAAGTGGATGGATATAACAGACATGGGACATGTCATTGCATCAAGGTATAACGTAATCGTTGTATCCTTGTCTAAACAACAAAGCATGACATTCTTTCCCCTTAGAAGTCAACCGCTGAAAAATTCTTCATTGCATCGTATAATTTGTATCGGTCATGTCTATGACAATCATTTTGTTGAGTTAACATTTTTTTTGCATACACAACATGTTTATTTAAAAGAACGTTGTCCCTTACCGCCTGTATCATTGTTATGGTCTAGCAATTGTCATCCGCAGGCGAAGTCGTGGCCAAATCCATATATTAGCAGAATGCAGCATTACAAGAGCTTCGTGATGTTCAAGAGAGACTATGTTGACATAAATGATGATTGA	1092	0.4029	MSERADMNYENVESCGANEPHVDCSDAFKTSQVFECREDVLRSDTNTGSRGRSTFVLIGCERSGEYKCRKKEFIRRDTGTRKCGCPFKLRCKPMVGGEGWMVKLICGVHNHELAKSLVGYPYAGQLTKAEKTLIADMAKSMVKPRNILLTLKEHNANSCTTIKQIYNARSAFCSSIRGSDLEMQHLMKLLEHSWSMVHSHLRKELANFSEDYIKLFGGTERFEELRMSLLVDGLTKVTMDKWMDITDMGHVIASRYNVIVVSLSKQQSMTFFPLRSQPLKNSSLHRIICIGHVYDNHFVELTFFLHTQHVYLKERCPLPPVSLLWSSNCHPQAKSWPNPYISRMQHYKSFVMFKRDYVDINDD*	364

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso10g0531	363	PANTHER	MALONATE-SEMIALDEHYDE DEHYDROGENASE	52	171	IPR010061	GO:0004491
	Gso10g0531	363	PANTHER	METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE ISOFORM X1	52	171	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso10g0531	Gso-Chr10	5926047	5928990	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Gso10g0531		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso10g0531	-		-	gsj:114411248	673.7