Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0522 ATGATAACCATTGTTGCTTCTTACAATGTCACTCCAAATCAGCCAACTCCCAGTGATCCTATTTGGCTATCCGATAGTGATCAAATTGGGCACCTACGTCATGTAAACACTATCTATGCCTACAAATCAAGACCCAACAACACCATTGATATTGAGAGGATGAAGAACTCTCTTAGCAAGATTTTGGTGCCATACTATCCAATAGCTGGCAGATTGAAGCTGACAAAAAATGGTAGAATGGAAGTGGATTGCAATGCAAAAGGAGTGACATTGATTGAAGCTGAAAGCACAGCCACATTTGGTGATTATGGAGACTTTGCACCTTCCGATTCCACCATGGAACTTGTTCCAAAAGTTGATTATACTCGACCCTCAGAGGACATGCCGCTAATGCTAGTGCAGTTAACAAGGTTCTGTGGTGGTGAAGGTCTTGCCATTGGAGTTGCTTTCTCTCATCCTTTGGTTGATGGTACTGCCGCTATTTTCTTCATCAACCGATGGGCAAAGCTGGTTCGAGGCGAAGAACTGGATCCCAATGAAGTTCCTTTTCTTGATCGAACACTACTCAAATTTCCAGAGCCATCAGAACCATGTGTTGATCTCCCAGAGTGGAAGCCTGTAAGGTTCATGCCAGACAACATTGCTGAGCAAAACAAGATAAGTGCTATATTGTTGAAACTCTCATCAAGCCAAGTGGAGAAGCTGAAGAAGAAGGCTAATGAACAACCTTCAAAAGAAGGGGTAAGACCTTATAGCAGATTTGAAGCTATTTCTTCTCATATATGGAGATGTGCATCTAAGGCTCATCACGCTCATGCATCTGATGAGAATCACCAACCAACTGTAGTTACGTTTAGTGTTGATATTCGCAATAGATTGAATCCACCTCTCCCTCAGAATTATTTTGGGAATGCTTTGGCAAAAACACTGACTCCTAAGTGTAGTGTGGGAGATATCTTATTAAACCCATTAAGCTATGGGGCTCAAAAGATAAGGGATGCGGTTTATGCGGTTACATATGAGTATATAAGGTCACACATAAGTTATGTTTTAGGGCAAGAGCAATTGGATAACATAAGGGCTTTTTTCTCGGGACAAGGAGACCTTATTAATGAACCCTATTCTGGGAATCCTCATAACATTCTCATCACAAGCTGGATGAGCTTGCCAGTGTATGATGCAGATTTTGGTTGGGGAAAGCCTGTGCACTTTGGTTTAGCAAAAGTATTTCGAGAAGTTAGGGCACATATTATTATAAGCCCTGATGGAGATGGTGTTCTTATTTCCATGAATTTCCTGACAGCACTTATGGATCTTTTTAAAAAATTCTTCTACGAGGATATATGA 1347 0.4113 MITIVASYNVTPNQPTPSDPIWLSDSDQIGHLRHVNTIYAYKSRPNNTIDIERMKNSLSKILVPYYPIAGRLKLTKNGRMEVDCNAKGVTLIEAESTATFGDYGDFAPSDSTMELVPKVDYTRPSEDMPLMLVQLTRFCGGEGLAIGVAFSHPLVDGTAAIFFINRWAKLVRGEELDPNEVPFLDRTLLKFPEPSEPCVDLPEWKPVRFMPDNIAEQNKISAILLKLSSSQVEKLKKKANEQPSKEGVRPYSRFEAISSHIWRCASKAHHAHASDENHQPTVVTFSVDIRNRLNPPLPQNYFGNALAKTLTPKCSVGDILLNPLSYGAQKIRDAVYAVTYEYIRSHISYVLGQEQLDNIRAFFSGQGDLINEPYSGNPHNILITSWMSLPVYDADFGWGKPVHFGLAKVFREVRAHIIISPDGDGVLISMNFLTALMDLFKKFFYEDI* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0522 448 Gene3D - 1 206 IPR023213 -
Gso10g0522 448 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 3 448 - -
Gso10g0522 448 Gene3D - 211 447 IPR023213 -
Gso10g0522 448 Pfam Transferase family 1 445 - -
Gso10g0522 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0522 Gso-Chr10 5761523 5763196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0522 2 446 Monolignol Biosynthesis Gene Families AT5G48930 35.762 8.46e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0522 K13065 - gmx:100814459 908.286