Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0514 ATGGCAGTTCCAGGGAGGCGCAACGGCATGAACGACGACGAAGAGGAATTAGACGACAACGCCCTTTTCGAAGAACAAGGTGCCGTCGAAGACGACGCCGATACCCCTCCTCACCTCCGCGACCTCTCCGCCGCCGCTCAGCTAGGCGACGTCCACGCCCTCCGTATCGCTCTTGATAACTTGACTGGTACCCTTATGCTATATACTGCAGATAACTTGACTGGTAGTATTGATGAGCCAGTGGAGGATGGGGATACTGCTCTTCATTTGACATGTCTATATGGCCATTTGGCTTGTGTCCAGCTGCTACTAGAAAGAGGGGCGAACATTGAGGCTAATGATGAAGATGGTGCTATTCCTTTGCACGATGCTTGTGCAGGAGGATTTACTGAGATTGTCCAACTGCTGCTTAGCAGAGCTAATGATGCTGAACATATAAAGAGAATGCTAGAATCAGTTGATTCTGAGGGTGATACCCCTCTCCATCACGCTGCTAGAGGTGAGCATGTTGAAGTAATTAGGTTGTTGCTGTCTAATGGTGCATCTCCCACAAAGGCTAACTTATACGGAAAGGCCCCTGCAGATTTGCCTGAACAGGAAGCTGCTCGGAGGCTGCTTGAAGCTGCAGCTCTTGCCATGGCATGCCAATAG 651 0.5038 MAVPGRRNGMNDDEEELDDNALFEEQGAVEDDADTPPHLRDLSAAAQLGDVHALRIALDNLTGTLMLYTADNLTGSIDEPVEDGDTALHLTCLYGHLACVQLLLERGANIEANDEDGAIPLHDACAGGFTEIVQLLLSRANDAEHIKRMLESVDSEGDTPLHHAARGEHVEVIRLLLSNGASPTKANLYGKAPADLPEQEAARRLLEAAALAMACQ* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0514 216 PANTHER SOWAH (DROSOPHILA) HOMOLOG 1 216 - -
Gso10g0514 216 ProSiteProfiles Ankyrin repeat profile. 116 148 IPR002110 GO:0005515
Gso10g0514 216 Pfam Ankyrin repeats (3 copies) 113 185 IPR002110 GO:0005515
Gso10g0514 216 SMART ANK_2a 116 145 IPR002110 GO:0005515
Gso10g0514 216 SMART ANK_2a 83 112 IPR002110 GO:0005515
Gso10g0514 216 SMART ANK_2a 156 185 IPR002110 GO:0005515
Gso10g0514 216 Pfam Ankyrin repeat 83 111 IPR002110 GO:0005515
Gso10g0514 216 ProSiteProfiles Ankyrin repeat region circular profile. 156 182 - -
Gso10g0514 216 ProSiteProfiles Ankyrin repeat profile. 83 115 IPR002110 GO:0005515
Gso10g0514 216 Gene3D - 8 144 IPR036770 -
Gso10g0514 216 ProSiteProfiles Ankyrin repeat profile. 156 188 IPR002110 GO:0005515
Gso10g0514 216 Gene3D - 145 214 IPR036770 -
Gso10g0514 216 SUPERFAMILY Ankyrin repeat 44 196 IPR036770 -
Gso10g0514 216 ProSiteProfiles Ankyrin repeat region circular profile. 83 115 - -
Gso10g0514 216 PANTHER SOWAH (DROSOPHILA) HOMOLOG 1 216 - -
Gso10g0514 216 ProSiteProfiles Ankyrin repeat region circular profile. 116 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0514 Gso-Chr10 5650296 5652746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0514 78 200 Ion Channels AT2G26650 29.932 3.90e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0514 - - gsj:114369969 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1600 20 46549573 46562166 Gso10g0514 10 5650296 5652746 GST