Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0512 ATGGCCTTGACTAACACACGCGCACCCATCACCTTCGGATCTCGATCACATGGACAATGGCGTTTCACCGCCATCGTGCGTAGAGCCCAAGAGGTCACTCACCACGACACGTGGCGAGCCGCTCTCTCCGAATTCATCTCCACACTCATCTTCATCTTCGCCGGCTCCGGCTCCGGCTCCTCCGTCGCCGTCGACAAGCCCTCCGCACTCTTCGTCACCGTCTCTGTGAGTTCTAACATCTCCGGTGGCCACGTCAATCCTGCTGTTACGTTCGGCGCCTTCGTCGGCGGCAACCTCACCTTGCTCCGCTGCGTCCTATTCTGGATCGCCTAG 333 0.5976 MALTNTRAPITFGSRSHGQWRFTAIVRRAQEVTHHDTWRAALSEFISTLIFIFAGSGSGSSVAVDKPSALFVTVSVSSNISGGHVNPAVTFGAFVGGNLTLLRCVLFWIA* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0512 110 Gene3D Glycerol uptake facilitator protein. 22 110 IPR023271 -
Gso10g0512 110 Pfam Major intrinsic protein 32 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso10g0512 110 PANTHER AQUAPORIN-8 26 110 IPR034294 -
Gso10g0512 110 ProSitePatterns MIP family signature. 84 92 IPR022357 -
Gso10g0512 110 SUPERFAMILY Aquaporin-like 30 110 IPR023271 -
Gso10g0512 110 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso10g0512 110 PRINTS Major intrinsic protein family signature 103 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso10g0512 110 PANTHER AQUAPORIN TIP1-1 26 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0512 Gso-Chr10 5635266 5636352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0512 26 110 Major Intrinsic Protein MIP AT2G36830 54.902 1.52e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0512 K09873 - gmx:100785064 194.512