Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0498 ATGAAGTCAAGATTTCTTAGAGGGTGCCTTAACAAGTGCAAGAAAATGTGCCTTAACAAGTGCATATCTTGTGAGGACTGTTGTGAATGGGCTTTGTGGTCTTCTTCTAATTTTCATGAAGCTTGCTCCAACAATATTCCAAGTGATGTTCCAAAGGGTCATTTGGTTGTGTATGTGGGAGAGAACCACAAGAGATATGTGATCAAGGTTGCATTGCTCCACCATCCACTCTTCAGGGCCTTGTTGGATCAAGCTCAGGAAGAGTATGATTTCATTGCTGATTCAAAACTATGCATTCCTTGTGATGAACACCTCTTCCTTAGTGTACTTCGATGTGCTAGCTCCCCACAGAACCAACGAGTGTGTCTTTGTCTTTGA 378 0.4233 MKSRFLRGCLNKCKKMCLNKCISCEDCCEWALWSSSNFHEACSNNIPSDVPKGHLVVYVGENHKRYVIKVALLHHPLFRALLDQAQEEYDFIADSKLCIPCDEHLFLSVLRCASSPQNQRVCLCL* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0498 125 Pfam Auxin responsive protein 37 112 IPR003676 GO:0009733
Gso10g0498 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 125 IPR003676 GO:0009733
Gso10g0498 125 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 2 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0498 Gso-Chr10 5430841 5431309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0498 39 120 Calmodulin-binding Proteins AT4G34750 50.575 1.89e-23 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0498 K14488 - gmx:102662255 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1518 19 44059736 44060256 Gso10g0498 10 5430841 5431309 PCT
Gso3g1534 3 41254643 41255263 Gso10g0498 10 5430841 5431309 PCT