Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0495 ATGAAGTGTTTTTCATTCTACTTTGGAGAGAAGAAGGATGGTCACAAGAGCTTGCAGTCAATATTGAGCCGGTTCAACAGTTCTACTTATGTTGAGGCTGAAATGAGAAGATCTGGTTCTGAATTGAACTCTATGGATGCCTCAGACAACAGCACAGACTCCCTTAGGAGAAGTTCTTTTCCCAGTTTGTCCCAAAGACCCAGCAACCTTAGAGTATTTACTGTATCTGAACTGAAAACAGCCACAAAGAGTTTTAGTCGCTCTGTCATGCTTGGAGAAGGGGGGTTCGGATGTGTCTACAAGGGGTTGATCAAGAGTGTAGATGATCCTTCCACAAAAATTGAAGTTGCAGTTAAACAACTTGGTAGACGAGGAATTCAGGGGCATAAGGAATGGGTGACAGAAGTGAATGTTCTGGGTATTGTGGAGCATCCCAATCTGGTGAAACTAGTGGGATACTGTGCTGATGATGATGAAAGAGGAATCCAGCGGCTTCTGATTTATGAATATATGCCTAACAGAAGTGTGGAACACCATTTATCACCACGATCAGAAAATCCTCTCCCATGGAATAGGAGGTTGAAAATAGCCCAAGATGCGGCTCGTGGCTTAGCATACCTGCATGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTCTGGACGAGCAGTGGAATGCAAAGCTGTCAGACTTCGGGCTAGCTAGATTGGGACCATCTGATGGGTTGACTCATGTCTCCACAGCGGTCGTAGGAACAATGGGTTATGCAGCTCCAGAATATGTTCAAACTGGACGTCTCACGTCAAAGATTGATGTATGGAGCTATGGTGTCTTCCTTTATGAACTCATCACTGGCCGGCATCCTATTGATCGAAATCGCCCCAAGGGTGAGCAGAAGCTGTTGGAATGGGTAAGGCCATACCTTTCAGATAGAAGGAAATTTCAACTAATATTGGATCCAAGACTTGAGAGAAAACACATCTTGAAGTCAGCACAAAAACTTGCTATAATAGCTAACAGATGCTTGGTCAAAAACCCAAAGAATCGCCCGAAGATGAGTGAAGTGTTGGATATGGTGACTCAGGTTGTGGAGTCTACAGTGAGTACTAATCAACAGCCACCCTTGAAGAGTGTAGCTGCCTCAGCAGAAGCTTCTCAGGGTACTAAAGTAAAGAACAAAAAAGTGACCATGGATCAAAATCCAGATTGCAATTGGTTAAGGATGGGGAGGCCAAAGCTTTTAAGAGCATTAGATTGTTGTAGCTTTAAAGTTTAA 1296 0.4306 MKCFSFYFGEKKDGHKSLQSILSRFNSSTYVEAEMRRSGSELNSMDASDNSTDSLRRSSFPSLSQRPSNLRVFTVSELKTATKSFSRSVMLGEGGFGCVYKGLIKSVDDPSTKIEVAVKQLGRRGIQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSPRSENPLPWNRRLKIAQDAARGLAYLHEEMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYVQTGRLTSKIDVWSYGVFLYELITGRHPIDRNRPKGEQKLLEWVRPYLSDRRKFQLILDPRLERKHILKSAQKLAIIANRCLVKNPKNRPKMSEVLDMVTQVVESTVSTNQQPPLKSVAASAEASQGTKVKNKKVTMDQNPDCNWLRMGRPKLLRALDCCSFKV* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0495 431 MobiDBLite consensus disorder prediction 377 397 - -
Gso10g0495 431 Gene3D Transferase(Phosphotransferase) domain 1 171 391 - -
Gso10g0495 431 SUPERFAMILY Protein kinase-like (PK-like) 59 366 IPR011009 -
Gso10g0495 431 ProSiteProfiles Protein kinase domain profile. 85 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0495 431 MobiDBLite consensus disorder prediction 41 64 - -
Gso10g0495 431 PANTHER OS01G0588500 PROTEIN-RELATED 17 409 - -
Gso10g0495 431 PANTHER KINASE 1B 17 409 - -
Gso10g0495 431 Gene3D Phosphorylase Kinase; domain 1 59 170 - -
Gso10g0495 431 MobiDBLite consensus disorder prediction 36 64 - -
Gso10g0495 431 CDD STKc_IRAK 91 368 - -
Gso10g0495 431 Pfam Protein kinase domain 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0495 431 ProSitePatterns Protein kinases ATP-binding region signature. 91 119 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0495 Gso-Chr10 5384026 5388421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0495 1 403 Glycoside Hydrolase AT3G07070 40.909 6.55e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso10g0495 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0495 - - gmx:100817276 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1520 19 44076244 44080470 Gso10g0495 10 5384026 5388421 PCT
Gso3g1536 3 41269621 41274381 Gso10g0495 10 5384026 5388421 PCT