Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0493 ATGACCTCACAAGTTGTCCTACACAACAATTTCGAAACCCAACCCTCCGTCACCGTCACCACCGCCACCAACACCGAGTCTCCACCCACCGCGCCACCGTCACTCGCCGTCGTCAAGAGACCCTCCACCAAGGACCGCCACACCAAGGTAAACGGCCGCGGCCGCCGCATCCGCATGCCACCGCTCTGCGCCGCGCGCATTTTCCAGCTCACGCGCGAGCTCGGCCACCGCTCCGACGGCGAGACGATCGAGTGGCTCCTCCGCCACGCCGAGCCCTCCATCATCGCCGCCACCGGCTCCGGCACCGTCCCCGCCGCCCCCGTCTCCTCCGTTGCGCCCTCCGCTCCCTCCTCCGAGCCCATGGTCGCCTGCCCCGTCACGGCGGTTGGCGCTCAGGGAATGTTCGCCATGGCGCCGCCGCAGCCGCAGCCGAATTGCCGACTCGACCTCTCTCCGCCGGCGGGGTTGGAATTCGCGGTGAATGGTTACCGGCACATGCCGTTCACGGCGCTGCTGTTGCAGCCGGCGACGGCGGAGGATAATCAGAACGACGAGTCTCTCGGCGAACAATGA 573 0.6754 MTSQVVLHNNFETQPSVTVTTATNTESPPTAPPSLAVVKRPSTKDRHTKVNGRGRRIRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGSGTVPAAPVSSVAPSAPSSEPMVACPVTAVGAQGMFAMAPPQPQPNCRLDLSPPAGLEFAVNGYRHMPFTALLLQPATAEDNQNDESLGEQ* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0493 190 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 21 117 - -
Gso10g0493 190 ProSiteProfiles TCP domain profile. 43 97 IPR017887 -
Gso10g0493 190 MobiDBLite consensus disorder prediction 1 31 - -
Gso10g0493 190 MobiDBLite consensus disorder prediction 1 34 - -
Gso10g0493 190 Pfam TCP family transcription factor 42 119 IPR017887 -
Gso10g0493 190 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 117 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0493 Gso-Chr10 5366060 5366990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0493 43 177 TCP Transcription Factor Family AT2G37000 58.519 1.51e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso10g0493 TCP 2.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0493 - - gmx:100779699 365.54