Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0487 ATGAGCAAGCTCAAAAGTTCACCACTAACTCACTATATCCTATCAAGAAGAAAAAACTATCATTCAGAGTTGAAGATGATGCTTAGTTCTTTTGTTGGGAAAATAGAAAAGGGTGTTTCACACTTCGTTCACAAAAATCCCCCACTGAGGTACTTGAATGAAGCCACAACCACGAGTGTGGTGCCAGATGATGTTAGGGAAGGATATTTTGCTGTTCTTACAACAAATGGTGGAGAATCCAAAAGATTCATTGTTGGCTTACATTACTTGAATGATCCTGCTTTCTTGGGACTGCTTGATCAAGCTGAAGAAGAGTTTGGTCTCAGGCAAAAGGGAGCTCTTGCAATCCCCTGTCAGTCTCAAGAATTACAGAAGATTCTAGAATGTTGCAGAGTGTAA 399 0.401 MSKLKSSPLTHYILSRRKNYHSELKMMLSSFVGKIEKGVSHFVHKNPPLRYLNEATTTSVVPDDVREGYFAVLTTNGGESKRFIVGLHYLNDPAFLGLLDQAEEEFGLRQKGALAIPCQSQELQKILECCRV* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0487 132 Pfam Auxin responsive protein 59 128 IPR003676 GO:0009733
Gso10g0487 132 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 26 132 - -
Gso10g0487 132 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 132 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0487 Gso-Chr10 5292634 5293362 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0487 62 129 Calmodulin-binding Proteins AT3G43120 42.647 2.31e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0487 - K14488 gmx:100500334 268.47