Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0484 ATGATGCTAATTAGGTCTTTTGTTGGGAAGATAGAAAAGGGTGTTTCACACTTTGTTCACAGAAGGCCCCCATTGAATGATCACTTCAACGAAGCCACAAGTGTGCTGCCAGATGATGTTATGGAAGGATATTTTGCTGTACTTGCAATAAAGGATGGAGAATCCAAAAGGTTCATTGTTGGCTTACATTACTTGAACGATCCTGCTTTCATTGAATTGCTAGATCAAGCTCAGGAGGAGTTTGGTTTCAGACAACAAGGAACTCTTATTGTTCCTTGTCAGCCACAAGAATTACAAAAGATTTTAGATGGTCGGAGTTGGAGAGCATAG 330 0.403 MMLIRSFVGKIEKGVSHFVHRRPPLNDHFNEATSVLPDDVMEGYFAVLAIKDGESKRFIVGLHYLNDPAFIELLDQAQEEFGFRQQGTLIVPCQPQELQKILDGRSWRA* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0484 109 Pfam Auxin responsive protein 34 102 IPR003676 GO:0009733
Gso10g0484 109 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 105 IPR003676 GO:0009733
Gso10g0484 109 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 2 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0484 Gso-Chr10 5275983 5276312 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0484 37 102 Calmodulin-binding Proteins AT3G43120 37.879 2.22e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0484 - K14488 gmx:100776513 224.942