Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0482 ATGCTTAGGTCGTTTGTTGGGAAGATAGAAAAGGGTGTTTCACTACTCTTTGTTCACAGAAGACCACCATTGAATCACTTCAATGAAGCCACAAGAGTGGTGCCAGATGATGTTAGGGAAGGATATTTTGCTGTTCTTGCAATAAAGGGTGAAGAATCCAAAAGGTTCATTGTTGGCTTACATTACTTGAATGATCCTGCTTTCTTAGGATTATTGGATCAAGCTGAGGAAGAGTTTGGTTTCGGGCAAAAGGGAGCTCTTGCAATCCCATGTCAGCCTCAAGAACTACAGAAGATTCTAGATGGTCGAAGAGTGTAA 318 0.4151 MLRSFVGKIEKGVSLLFVHRRPPLNHFNEATRVVPDDVREGYFAVLAIKGEESKRFIVGLHYLNDPAFLGLLDQAEEEFGFGQKGALAIPCQPQELQKILDGRRV* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0482 105 Pfam Auxin responsive protein 33 100 IPR003676 GO:0009733
Gso10g0482 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 105 IPR003676 GO:0009733
Gso10g0482 105 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0482 Gso-Chr10 5269750 5270067 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0482 35 100 Calmodulin-binding Proteins AT3G43120 43.939 6.19e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0482 - K14488 gmx:100791766 211.46