Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0478 ATGATGCTCTGGTCTTTCTTTGGAAAGGTACATGACGGTCTTGCGGTAGTGTTTGCACCGATTAAGAGATCGCTGACACCGATCAGCAATGACGATTCAGCGAGAGAGGTGCCGGGTGACGTTTTGGAAGGGCACTTTGTGGTTCTTGCTAACAAGGGTGAAGAAAGAAAAAGGCTTATTGAGGAGTTGCACTATTTGGATGACCCTGCATTTTTGGGACTGCTGGAGCGGGCAAGAGAAGAGTATGGTTTCAGACAGAAGGGGGTTTTGGTCATTCCCTGCTACCCTCAAGAACTAGAGAAGATTCTAGAACAACAACCAAGGGATCATGAAAGTACTGTTGGAGGAGATGGAGGCAAATTAACGGATTCAGTTCAAGATATTAGTGAATGTAGCGCCATTTCATGCAGTAGTTGA 417 0.458 MMLWSFFGKVHDGLAVVFAPIKRSLTPISNDDSAREVPGDVLEGHFVVLANKGEERKRLIEELHYLDDPAFLGLLERAREEYGFRQKGVLVIPCYPQELEKILEQQPRDHESTVGGDGGKLTDSVQDISECSAISCSS* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0478 138 MobiDBLite consensus disorder prediction 103 122 - -
Gso10g0478 138 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 105 IPR003676 GO:0009733
Gso10g0478 138 Pfam Auxin responsive protein 33 104 IPR003676 GO:0009733
Gso10g0478 138 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0478 Gso-Chr10 5240036 5240747 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0478 29 134 Calmodulin-binding Proteins AT4G34750 34.906 4.49e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0478 - K14488 gmx:100809715 243.817