Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0462 ATGGTTTCTGATAGATCAAAATCTGTGAGATTTCAAGATGAACTTGAGACAAATAAGTTAATGGACAACAACAAAGAAAGTCACTTGTCAATGGTGTCCTTTAATGAAGTGAGTAATGATAAACAAAAGGGTGGGAAGGATGCAATAGGCAACAAGTCCTCTGAGGATGGAAGAGAACTTTCAAGGGTCTTCTCTGAGGATTATGATGCAGCAGAGATTTTGGTATTGGATCCTAGGGGACATAGAGTAAACACATGGAACAAAATTTTCTTAGCGGCGTGTTTGCTTTCGTTATTCGTGGATCCTCTATTCTTTTACTTACCAGTGGCTAAGAAAGACAAGTGCATTGATATGTCAGTTGGTCTTGAAGTGTTCCTCACCATAATCCGATCATTGATTGATGCATTTTACATTATTCAGATTTATTTTCGGTTTCAAACCGCTTATATTGCTCCTTCCTCTCGTGTTTCTGGTAGAGGAGAGCTTATCATAGACTCTTCAAAAATTGCATCGAAGTACATGCGAAGAGACTTCTGGCTTGATCTAATGGCTGCTCAACCACTTCCACAGGTTTTAGGATCCTCTTGGTACCTGTTATCAATTGAACGCCAGAATGAATGTTGGAAGAAAGTTTGTACACTGCAGTACCCACACTGCCAGTATCGTTATCTTGATTGTCAAAGCATGGGTGACCCGGATAGGATTGCTTGGTTAAGATCAAGTAATCTCTCAAGTCTATGTGATCAAAGCAGTGATTTCTTTCAATTTGGCATCTTTGCTGATGCTCTCAATTTGGAAGTTACGGCCTCTAAATTCTTCAACAAATACTGTTACTGTCTCTGGTGGGGACTAAGGAATCTTAGCTCTGTGGGACAGAATCTCTTAACTGGCACACGTGTTGCAGAGATCAATTTTGCTGTGATCATTGCAGTTCTTGGATTGGTGCTTTTTGCATTGCTTATAGGCAATATGCAAACCTACCTGCAATCCACCACTACACGGCTAGAAGAATGGAGAATAAGAAGGACAGATACAGAAAGATGGATGCATCACAGGCAGCTCCCCCGTTACCTAAAGCAAAACGTGCGACGTCATGAACAATTCAGATGGGTTGCTACTAGGGGAGTTGATGAGGAAACTATTCTCAGAGACCTTCCCATAGATCTAAGACGTGACATCAAACGCCACCTTTGCCTCAATCTAGTCCGACAAGTACCACTATTTGATCAAATGGATGAAAGGATGCTAGATGCAATATGTGAAAGGCTGAAACCTTCTCTTTTCACTCCAGGCGCTTGTGTGGTTCGCGAGGGTGACCTGGTGAACGAGATGCTTTTCATTGTTCGAGGACGCCTAGATTCTTGCACCACCAACGGTGGCAGAACAGGTTTCTTCAACACCTGCAGACTTGGCTCTGGTGACTTCTGTGGTGAAGAGCTCCTGCCATGGGCCTTGGACCCTCGTCCAACGGTAGTCCTTCCTTCATCAACTCGCACGGTGAAAGCCATCACCGAAGTGGAAGCCTTTGCACTCATTGCAGGGGACTTGAAGTTTGTGGCAGCACAATTCAGAAGGCTGCACAGCAAACAACTGAGGCACACTTTTAGGTTCCACTCCCACCAGTGGAGGACTTGGGCTGCGTGCTTCATACAAGCAGCATGGTTCAGGTATAAAAGAATAAAGGAGACAAGTGAACTCAAGAGAAAGGAGAATCTGATGATGGCCTTTGTTCCTGGAACAACTGGCTCTGAACATTTCTCTGCACCTCTTCAGGCCCCAAAGGGCACAATGTATGCTGCAAAACTAGCTTCCAGCCCAAGGAAAGGTAGGAGCCTAAGATATGGGCCTGAACTTGACATTCTTGGTTCATTGAGGAAGCCCCTTGAACCAGACTTTACTGATGATGAGTGA 1911 0.4411 MVSDRSKSVRFQDELETNKLMDNNKESHLSMVSFNEVSNDKQKGGKDAIGNKSSEDGRELSRVFSEDYDAAEILVLDPRGHRVNTWNKIFLAACLLSLFVDPLFFYLPVAKKDKCIDMSVGLEVFLTIIRSLIDAFYIIQIYFRFQTAYIAPSSRVSGRGELIIDSSKIASKYMRRDFWLDLMAAQPLPQVLGSSWYLLSIERQNECWKKVCTLQYPHCQYRYLDCQSMGDPDRIAWLRSSNLSSLCDQSSDFFQFGIFADALNLEVTASKFFNKYCYCLWWGLRNLSSVGQNLLTGTRVAEINFAVIIAVLGLVLFALLIGNMQTYLQSTTTRLEEWRIRRTDTERWMHHRQLPRYLKQNVRRHEQFRWVATRGVDEETILRDLPIDLRRDIKRHLCLNLVRQVPLFDQMDERMLDAICERLKPSLFTPGACVVREGDLVNEMLFIVRGRLDSCTTNGGRTGFFNTCRLGSGDFCGEELLPWALDPRPTVVLPSSTRTVKAITEVEAFALIAGDLKFVAAQFRRLHSKQLRHTFRFHSHQWRTWAACFIQAAWFRYKRIKETSELKRKENLMMAFVPGTTGSEHFSAPLQAPKGTMYAAKLASSPRKGRSLRYGPELDILGSLRKPLEPDFTDDE* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0462 636 Pfam Ion transport protein 85 334 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso10g0462 636 PANTHER PROTEIN CNGC15A 28 192 - -
Gso10g0462 636 PANTHER PROTEIN CNGC15A 190 634 - -
Gso10g0462 636 Gene3D Jelly Rolls 405 525 IPR014710 -
Gso10g0462 636 MobiDBLite consensus disorder prediction 40 54 - -
Gso10g0462 636 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 28 192 - -
Gso10g0462 636 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 190 634 - -
Gso10g0462 636 CDD CAP_ED 407 538 IPR000595 -
Gso10g0462 636 SMART cnmp_10 407 538 IPR000595 -
Gso10g0462 636 MobiDBLite consensus disorder prediction 35 54 - -
Gso10g0462 636 Gene3D Helix hairpin bin 333 398 - -
Gso10g0462 636 SUPERFAMILY cAMP-binding domain-like 336 528 IPR018490 -
Gso10g0462 636 SUPERFAMILY Voltage-gated potassium channels 77 329 - -
Gso10g0462 636 ProSiteProfiles cAMP/cGMP binding motif profile. 407 492 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0462 Gso-Chr10 5041093 5046913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0462 163 635 Ion Channels AT2G28260 60.888 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0462 K05391 - gmx:100815543 916.376