Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0453 ATGCAAATTCTCACCGCCCTCTCTTTCTCTTCCTTCTTTCTTCTTCTCTTATTCCTTTTCCTATTCGGTAACGCACACGGGTTCGGCTCAATGGGACCAATCTCCGCGTCGTTCGGAAGAGACGAGGTTTTTTGCTCCATCGATGCTAGTGGAAAACAGGACGTTATTTGTTGGGGGAACAACGCCACGTCACCGTCGCTCTCCGCCGTCGCAAACGCCATCCCTGCTATGTCAGCACTCTCCGGCGGGGAGGGCTTTCTCTGCGGCATTTTAGCGAACACATCGCAAGCGTTTTGCTGGAGCGCTGTAACGAAACCGAGCGCAGATCTAATCCTCGTGCCTCCGGCGTACCGGAACACCGCTTATTCCCACATCGCCGCCGGCCAGAATCACGTATGCGCCGTCAAGGGATCCTACTTCGCCGATCGCGATTCCGGCACCGTTGACTGCTGGGAAATCACGAAAACCGCGAACAAAACTTTGACGGCGAAACAGAGCGATAAGTTCAACGACCAATTAATGTCGAATCTGGAGGTGAAGAGGGTTGTTTCCGGTGAAGGGTTCACCTGCGGCGAGGTAAACGACGGTGGACTAATCTGCTGGGGACCCACTTCGGAAAATTTGGGAAACATTAACATTTCCAATGTTACCGACAGTTTTGCGGTTCTGGTGGCTGGCCGGAGCGCCGTTTGCGGCGTTTTCAACGTTTCCGGCGAGTTAAAATGCTGGGGCGACCCGGTTTCGTATTCGGATCCTCCGTTGGATTCGGTTCGGTTAGTCTCTCTATCAGCAGGGGCTAACCATTTCTGTGGCGTGAGAATGGATAATCACGAAGTTGAATGCTGGGGTGATTTGAATTCCTCGGTTGTTCCAAAAGGTAATGGCTTTATGGCTATTGCTTCTTCGGATTTCACCACGTGCGGGATCAGGGAAGATGATCTTCTTCTGGATTGTTGGTTGGTCAACGCTTCAAAACCCGATTTTGATCCTCCTTTGGAGCTTTCAAGCCCTGGACTCTGCAGGGCTAGTGAGTGTGGGGTTGATGAGTTTGCTTTCAATGTTAGTGTTCTTAACGAGCTAGCTTTGACAAGCTTGTGTGTTAGAGAAGATTTGAGGATTTGTTCTCCTTGTGGGTCAAATTGTTCCAAAGGATACTTCTTGTCTAGTGAATGTACTAGGAATGCTGATAGAGTTTGCACTGCTTGTTCTCTTTGTCAGAACAGCTCTTGTTTTAATGTTTGTGGACTTCACTCTTCATCGGGGCTTCATTTGCATTGGCATTGGCATGATTTACGTAAATGGGTGGTGATAGTTGGGTGTCCAGTTTTGGGGTTTTTGGTTATTTTGCTTTGTGGGTGTCTTCTTATGGTTAGAAAGAGGTCTAAGAAGCAATCCAAGTCTTGCATGGGAAAACCGGATCAGGAGGATGATCATGTGAATGTTGCTCTTAACTCTACACCTTCGGTTAATTCTTGCCCCGGTGTGCCTCAGGTTTTCAGGCTTTCTGAGCTGAAGGATGCTACTAATGGGTTCAAGGAGTTTAATGAACTTGGGAGGGGGAGTTATGGGTTTGTGTATAAGGCTGCATTAGCTGATGGGAGAGTGGTTGCTGTTAAAAGAGCAAATGCTGCTACCATTATCCACACTAATAACCGTGATTTTGAAACGGAGCTGGAGATTCTATGCAAAATTCGCCACTGTAATGTTGTCAACTTGTTGGGGTATTGCGCGGAGATGGGGGAGAGGTTGCTTGTCTACGAGTATATGCCTCACGGGACGCTCTATGATCACCTCCACGGTGGTCTTTCTCCGCTGACTTGGAGCCTCAGGTTGAAGATTGCGATGCAGGCCGCAAAAGGACTTGAGTATCTTCACAAGGAACCTGTGCCTCCAATTGTGCACAACGATCTTAAAAGTTCCAACATTCTTTTGGATTCGGAGTGGGGGGCAAGGATTTCGGACTTTGGACTTCTTGCTTCGAGTGACAAGGATCTCAATGGGGACCTAGAAAGTGATGTTTACAATTTTGGGATTGTGTTGCTTGAGGTTCTGAGTGGAAGAAAGGCTTATGATAGGGATTACACCCCTTCCAACATGGTTGAGTGGGCAGTGCCTTTGATCAAACAAGGGAAAGGTGCTGCTATAATTGATAGGTACGTGGCTCTTCCAAGAAATGTTGAACCTTTGCTAAAGCTTGCTGATATAGCAGAGCTTGCTGTGAGAGAGCGTCCAAGTGAGCGTCCACCTATGTCAGATATAGCATCTTGGTTGGAGCAAATTGTGAAGGACGGATTGATCTTATAG 2304 0.4796 MQILTALSFSSFFLLLLFLFLFGNAHGFGSMGPISASFGRDEVFCSIDASGKQDVICWGNNATSPSLSAVANAIPAMSALSGGEGFLCGILANTSQAFCWSAVTKPSADLILVPPAYRNTAYSHIAAGQNHVCAVKGSYFADRDSGTVDCWEITKTANKTLTAKQSDKFNDQLMSNLEVKRVVSGEGFTCGEVNDGGLICWGPTSENLGNINISNVTDSFAVLVAGRSAVCGVFNVSGELKCWGDPVSYSDPPLDSVRLVSLSAGANHFCGVRMDNHEVECWGDLNSSVVPKGNGFMAIASSDFTTCGIREDDLLLDCWLVNASKPDFDPPLELSSPGLCRASECGVDEFAFNVSVLNELALTSLCVREDLRICSPCGSNCSKGYFLSSECTRNADRVCTACSLCQNSSCFNVCGLHSSSGLHLHWHWHDLRKWVVIVGCPVLGFLVILLCGCLLMVRKRSKKQSKSCMGKPDQEDDHVNVALNSTPSVNSCPGVPQVFRLSELKDATNGFKEFNELGRGSYGFVYKAALADGRVVAVKRANAATIIHTNNRDFETELEILCKIRHCNVVNLLGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLTWSLRLKIAMQAAKGLEYLHKEPVPPIVHNDLKSSNILLDSEWGARISDFGLLASSDKDLNGDLESDVYNFGIVLLEVLSGRKAYDRDYTPSNMVEWAVPLIKQGKGAAIIDRYVALPRNVEPLLKLADIAELAVRERPSERPPMSDIASWLEQIVKDGLIL* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0453 767 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Gso10g0453 767 Gene3D Transferase(Phosphotransferase) domain 1 665 764 - -
Gso10g0453 767 Gene3D Transferase(Phosphotransferase) domain 1 589 664 - -
Gso10g0453 767 SUPERFAMILY RCC1/BLIP-II 34 286 IPR009091 -
Gso10g0453 767 SMART serkin_6 511 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0453 767 Gene3D - 37 325 IPR009091 -
Gso10g0453 767 SUPERFAMILY Protein kinase-like (PK-like) 487 758 IPR011009 -
Gso10g0453 767 Pfam Protein tyrosine and serine/threonine kinase 515 661 IPR001245 GO:0004672|GO:0006468
Gso10g0453 767 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR1 31 765 - -
Gso10g0453 767 PANTHER OS01G0750732 PROTEIN 31 765 - -
Gso10g0453 767 ProSiteProfiles Protein kinase domain profile. 511 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0453 767 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Gso10g0453 767 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 344 399 IPR001368 GO:0005515
Gso10g0453 767 Gene3D Phosphorylase Kinase; domain 1 477 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0453 Gso-Chr10 4886502 4889495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0453 15 759 Receptor kinase-like Gene Family AT3G59420 30.958 5.30e-108 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gso10g0453 PK_Tyr_Ser-Thr 2.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0453 - - gmx:100814476 1528.07