Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0441 ATGGCCGACGACTTCGAATTCGCCGACAAAGTCCCTCCTTCCTTCGATCGCGCGGGTTCAAAAGGGTTCAACCCAGCTTTAATTGTTCTCCTGCTTGTTGGTGGGTTGCTGTTGACATTCCTCATTGGAAACTATGTACTCTACACATATGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAGCCAGTCTCAAAGAAGAAGATGAAAAAGGAGAGACTGAAGCAGGGCGTCTCTGCACCTGGAGAGTAG 249 0.4859 MADDFEFADKVPPSFDRAGSKGFNPALIVLLLVGGLLLTFLIGNYVLYTYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0441 82 Pfam DNA binding protein S1FA 19 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gso10g0441 82 MobiDBLite consensus disorder prediction 58 82 - -
Gso10g0441 82 PANTHER DNA-BINDING PROTEIN S1FA2 3 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gso10g0441 82 MobiDBLite consensus disorder prediction 1 21 - -
Gso10g0441 82 MobiDBLite consensus disorder prediction 58 72 - -
Gso10g0441 82 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0441 Gso-Chr10 4680758 4682997 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Gso10g0441 S1FA 4.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0441 - - gmx:100500059 147.517