Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0419 ATGACAAGGGTTGTCCAGATGAGTGTTGATGGCGACAGCAAAGAGCTGAAAGAACTGAATCAGCGCTTACGAGATGGGAAGAAGATTGCTGGTGGGGAGCGTGGTTTATGCGAGGAAGTGAAATGTAATGGAATTGCTGAAGAAGTTAAGGTTGAACAGGGGGGGACTGTGGAGTCCTCCTCTGTCCAGCAGCATATACCACAGCCTCAAGGGGCAATAATTTGTTGGGAGAGGTTTTTGCATATTAGATCCCTTAAGGTCTTGCTTGTGGAGATTGATGACTCTACCCGTCATGTTGTCACTGCACTGCTTCGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAACGGATTGCAAGCTTGGAAGATATTGGAGGATTTAACCAATCATATTGATCTTGTTTTAACTGAGGTGGCAATGCCTGGCTTATCAGGCATTGGACTTCTATACAAGATTATGGGCCACAAAACCCGCAAAAATATTCCAGTAGTTATGATGTCATCTCATGATTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTTGACTTTCTAGTTAAACCCATACGGAAGAATGAGCTTAAAAACCTGTGGCAGCATGTTTGGAGAAGATGTCACAGTTCTAGTGGGAGTGGCAGTGAAAGTGGCACACAAACCCAGAAGTCTATAAAATCAAAGAGTCTTGAGAAGTCTGATAATAATTCTGGAAGCAATGACGAAGATGATAATGAAAGTATAGGCCTGAATAATGTGGATGGAAGTGACAATGGTAGTGGCACTCAGAGCTCATGGACCAAACGTGCTGTAGAAGTTGATAGTCATAAACCAGTTTCCCAGTGGGATCAAATAGCTGAGTGCCCTGACAGTACCTGTGCTCAAGTTGTTCACTCCAATGCTGAAATGGGTGGGAACAAGGTGGTTCCTCTAGCTGCAAAGGATTGTGCAGAACAGAATGAACAACTTGGTTCTCAACATAGCAATGCACCTGATGTCGGCCCCTCTAAATTCAGTGAGCAAATTAATAGAGGACAACTGGACCTTAATTGTGAAAATCAATCTAGCAAGCTAAGGTGCAAAGGTTTATCACTGTCTGATGCCATTACTAGTACTTGTGATTCTCAGATGCATAGTGGAGAATTTGAAGCCCTAAATAAAAAACCCAAGTCCTCAGATATTGAAAATAAAGGTACTAATAATGATGAAGAATTGCCATCTCTTGAGCTCAGTTTAAAGAGGCTTAGAGGAGTTGAAGATGCTGGTATTACAATTCAGGATGACCGGAATGTTTTAAGACGTTCTGATCAGTCTGCTTTCTCAAGGTACAATGCAGCCTCTAACACTAAGAAATCTCCCACTGGATGTGTTGGAAGCAATTCTCCTTATAATAATAGCTTAGAAGTTACAAAGAAAGATTCATCTCGTGATATTCAATCTCATTCTTGCGGCAATCCTCCTAACCAAAACTCAAATGGTGCTAGCAATAACATTGATATGGGTTCCACTACTAATAATGCTTATGCTAAATCTGCAGTTATGAGTGAGCCAGCAGGGGCATCAACAACAAAATGTTTGTACCAAACATCTGCTTTCCAGCCTGTAAAAAACAGCCTTGTTTGTACCTCTCAACAAGTTGTCTTAAATAATACTGAAGATATGTCGGCAACAATTCTGGCACCACCTAAACTAGACAGACATAAAGATTCTGCAGCTCTGGACTTCCATCTCCATTGTGAAAACCATAACTGTATTGCTGACAACATGAAGCATCAGCTGCCACCTGATCATGATGCTGAATCTATAAAGAAAATGGCTACTGCTGCTCCACATTGTGGATCATCAAACGTGGAAGAAGTGCTAGTTGAAGGTAATGTTGGAAACCACAGTATCAATAGAAGTGTTTCAGGCAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGCACAGCAGTTAATGCTGGAGGGACAAACACGGAAAGCAACAATGGACTCACTGGGAATAGTGGCAGTGGTGATGCTAGTGGAAGTGGAAGTGCCAACAGAGTAGATCAAAACAAGACTTCTCAAAGGGAAGTGGCCTTAACTAAATTTCGCCAAAAGAGAAAAGAGAGAAGGGAGAGGTGCTTTCATAAAAAGGTTCGATATCAGAGCAGAAAGAGATTAGCTGAACAACGACCTCGATTTCGTGGACAATTTGTGCGACAGACCTCTAACGAAAATGCAAGTGAGGCAACAACAGATAGCTGA 2250 0.4187 MTRVVQMSVDGDSKELKELNQRLRDGKKIAGGERGLCEEVKCNGIAEEVKVEQGGTVESSSVQQHIPQPQGAIICWERFLHIRSLKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLVLTEVAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSIKSKSLEKSDNNSGSNDEDDNESIGLNNVDGSDNGSGTQSSWTKRAVEVDSHKPVSQWDQIAECPDSTCAQVVHSNAEMGGNKVVPLAAKDCAEQNEQLGSQHSNAPDVGPSKFSEQINRGQLDLNCENQSSKLRCKGLSLSDAITSTCDSQMHSGEFEALNKKPKSSDIENKGTNNDEELPSLELSLKRLRGVEDAGITIQDDRNVLRRSDQSAFSRYNAASNTKKSPTGCVGSNSPYNNSLEVTKKDSSRDIQSHSCGNPPNQNSNGASNNIDMGSTTNNAYAKSAVMSEPAGASTTKCLYQTSAFQPVKNSLVCTSQQVVLNNTEDMSATILAPPKLDRHKDSAALDFHLHCENHNCIADNMKHQLPPDHDAESIKKMATAAPHCGSSNVEEVLVEGNVGNHSINRSVSGSNNGSNGQNGSSTAVNAGGTNTESNNGLTGNSGSGDASGSGSANRVDQNKTSQREVALTKFRQKRKERRERCFHKKVRYQSRKRLAEQRPRFRGQFVRQTSNENASEATTDS* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0419 749 SMART REC_2 85 200 IPR001789 GO:0000160
Gso10g0419 749 Pfam Response regulator receiver domain 87 198 IPR001789 GO:0000160
Gso10g0419 749 MobiDBLite consensus disorder prediction 442 502 - -
Gso10g0419 749 MobiDBLite consensus disorder prediction 628 693 - -
Gso10g0419 749 MobiDBLite consensus disorder prediction 731 749 - -
Gso10g0419 749 ProSiteProfiles CCT domain profile. 694 736 IPR010402 GO:0005515
Gso10g0419 749 MobiDBLite consensus disorder prediction 384 405 - -
Gso10g0419 749 MobiDBLite consensus disorder prediction 320 339 - -
Gso10g0419 749 MobiDBLite consensus disorder prediction 209 273 - -
Gso10g0419 749 ProSiteProfiles Response regulatory domain profile. 86 204 IPR001789 GO:0000160
Gso10g0419 749 MobiDBLite consensus disorder prediction 628 749 - -
Gso10g0419 749 MobiDBLite consensus disorder prediction 479 502 - -
Gso10g0419 749 SUPERFAMILY CheY-like 83 209 IPR011006 -
Gso10g0419 749 MobiDBLite consensus disorder prediction 209 226 - -
Gso10g0419 749 MobiDBLite consensus disorder prediction 442 469 - -
Gso10g0419 749 Pfam CCT motif 691 736 IPR010402 GO:0005515
Gso10g0419 749 Gene3D - 84 246 - -
Gso10g0419 749 PANTHER TWO-COMPONENT RESPONSE REGULATOR 33 318 IPR045279 GO:0009736
Gso10g0419 749 PANTHER TWO-COMPONENT RESPONSE REGULATOR 324 725 IPR045279 GO:0009736
Gso10g0419 749 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 324 725 - -
Gso10g0419 749 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 33 318 - -
Gso10g0419 749 MobiDBLite consensus disorder prediction 242 269 - -
Gso10g0419 749 CDD psREC_PRR 87 190 - -
Gso10g0419 749 MobiDBLite consensus disorder prediction 701 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0419 Gso-Chr10 4447664 4459488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0419 161 738 Response Regulator Gene Family AT5G02810 47.200 6.27e-113 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Gso10g0419 Response_reg 3.4e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0419 K12129 - gmx:100806454 1390.94