Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0400 ATGAGATTCATTTGCTTCGAGCCGAAAACGCAGTCGTTTTCCTTTTCCCGCCACACTCCGCCAACGAGTTCATCATCACCTTCTACAAGCACTAAGGAGAGCTTTGAAGAAGCAGAAACTCTGATACTAAAATGGAACCCTGAAACCTCTGCGTACGGAAGAGTAACCTCTCTCTTCTACAACGACAAAGCTGAAGCCATGCACTACATCCACTGCGTTAACATGCTTCAGAAAACCATGCACTCTTTGATCTCTCAGAACGCTTCCTCGCAGAAACTCATTCTCGCCCATAACCTAATGCAAATGGCCATGAAGACACTCCAGAAAGAGTTCTATCAGATATTATCAATGAACCGGGCCCACCTTGACCCTGAATCCGTCTCCACCAGATCCTCCACCACTTCAACAAGAACCTCTTTCTGTTCCGACAGTTACGACGGCGGCACAGCGGAAGAAGATGTTCGCGAATCGGGGGATTGTATCTCCGAAGTCGAACGTGTTTCTTCTGAAGCCATGGCGGATCTGAAATCCATCGCGGATTGCATGATTTCCAACGGTTATGCGAAGGAATGCGTCAGCGTTTACACGACCATGAGAAAATCGATCGTCGACGAAGGCATTTATCGCCTCAACGTGGAGGAGTTTAGTTCCTCGAAGGTGAACAAGATGCACTGGGATGTGCTCGAGTTGAAAATCAAGAGCTGGTTGGAGGCGGTTAAGATCGCCGTGAGGACGCTCTTCGCAGGAGAGAGGATCCTCTGCGATCACGTATTCGGTGCGTCGCAATCCATCAGTGAAGCTTGCTTCGCCGAGATTTCTAGAAGCGGAGCAAATCTGCTGTTCGGATTCCCCGAACTAGTCGCGAAAACGAAGAAATCGCCGCCGGAGAAGATCTTCCGGATGATTGATATGTACGCTGCAATAGCCGGGATGTGGTCGGAGATTGAATCGATATTCTCGCTCGATTCAACAACAGCTGTTAAATCTCAAGCCTACGGTCTTCTTCTCGGACTCTCCGAGTCTGTACGAACGAGTTTATCGGACTTTGCGACCGCAATTCAGAAAGACTCTTCCAAATCGACGGCGAACTTCGCCGGCGTTCATTCCCTGACAGTGCAAGTGATGAATCACTTGACTACTCTCGCGGATTACAGCAACGTGCTCTCGGAAATTTTCTTCGACGTGCCACCGCCGCCGAGGTCGCCGTTGCCGGAATCTTACTTATACAGTCCAGAATCCGACAACACCACCACGACGGAGACGGAGTTTTCAGTGCAGATGGCGCGGCTTATTCTGATTCTTCTCTGCAAGATCGACGGGAAATCAAGGTATTACAAGGAAGTTTCGTTGTCTTACCTGTTTCTCGCGAACAATCTCCGGCACATACTGGCCAAGGTCCGTGCGTCGAACTTGCATTACGTTCTCGGCGACGATTGGGTTTTGAATCATGATGCGAAGGTGAAGAGGTTGACGGCGAACTACGAGAGAGTGGCGTGGGGCAAAGTGCTTTCGTCTTTGCCGGAAAATCCAACGGCGGAAATGTCGGCGGCGGAGGCGAGGGTTATGTTCGGGAATTTCAATTTTGAATTCGAGAAAGCTTATCGGAGAGAGAACACGTTCACCGTGCCGGAACAGGAATTTCGAGAAGAAATGAAAGCGTCTCTTGTGAGAAAAATAACCCCAATTTACCGCGAGGCGTATGAAACGCACCGTATTGTAATGGGAACGGTGAGGGAAATAAGAGAGTATGTCACATTTGCCCCTGAAGATGTTGAGAATTACATGATGAATCTTTTCTCTGAGGGAAGAGCGAGCTCCGGTAGCGGAGGAAACAAGTCATGTTTTGTAAAGTGTAAAAAATGCAAATGA 1869 0.489 MRFICFEPKTQSFSFSRHTPPTSSSSPSTSTKESFEEAETLILKWNPETSAYGRVTSLFYNDKAEAMHYIHCVNMLQKTMHSLISQNASSQKLILAHNLMQMAMKTLQKEFYQILSMNRAHLDPESVSTRSSTTSTRTSFCSDSYDGGTAEEDVRESGDCISEVERVSSEAMADLKSIADCMISNGYAKECVSVYTTMRKSIVDEGIYRLNVEEFSSSKVNKMHWDVLELKIKSWLEAVKIAVRTLFAGERILCDHVFGASQSISEACFAEISRSGANLLFGFPELVAKTKKSPPEKIFRMIDMYAAIAGMWSEIESIFSLDSTTAVKSQAYGLLLGLSESVRTSLSDFATAIQKDSSKSTANFAGVHSLTVQVMNHLTTLADYSNVLSEIFFDVPPPPRSPLPESYLYSPESDNTTTTETEFSVQMARLILILLCKIDGKSRYYKEVSLSYLFLANNLRHILAKVRASNLHYVLGDDWVLNHDAKVKRLTANYERVAWGKVLSSLPENPTAEMSAAEARVMFGNFNFEFEKAYRRENTFTVPEQEFREEMKASLVRKITPIYREAYETHRIVMGTVREIREYVTFAPEDVENYMMNLFSEGRASSGSGGNKSCFVKCKKCK* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0400 622 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 610 - -
Gso10g0400 622 Pfam Exo70 exocyst complex subunit 233 595 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso10g0400 622 MobiDBLite consensus disorder prediction 125 145 - -
Gso10g0400 622 MobiDBLite consensus disorder prediction 12 33 - -
Gso10g0400 622 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 610 IPR004140 GO:0000145|GO:0006887
Gso10g0400 622 MobiDBLite consensus disorder prediction 125 152 - -
Gso10g0400 622 Gene3D Exocyst complex component Exo70 55 606 - -
Gso10g0400 622 SUPERFAMILY Cullin repeat-like 33 599 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0400 Gso-Chr10 4237742 4239894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0400 35 601 EXO70 exocyst subunit family AT3G09520 52.787 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0400 K07195 - gmx:100798477 1161.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g0400 10 4237742 4239894 Gso19g1455 19 43435491 43437525 PCT
Gso10g0400 10 4237742 4239894 Gso3g1467 3 40659689 40662007 PCT