Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0396 ATGGACAAATCGCGCCACAGCAAGTCCAAGGCAGCACCCTGCTCCACCCACCAACCCCAACTACCTCTTCCTCAAGGTCAAGGGAACAAAGAGGTTCATAGACAGCGACAGCCTCTGAATCTGTTGTCTCCTGATTCTGGTTCATCCAGTGGTGGGGTTGCAGACAAGGATTCATTCTCATCTAAATTCGGGTGGAGATCTACGAAGCAGCTGTTTGGAACTCCGATTAAGAAGTTATTAGCTGAAGAGATGTCACCGAGAGCTGAATCCAAAAGAAGATCACCTGGTGTGATCGCCAAATTAATGGGGCTTGATGGGCTGCCGTTCCAGCAGCCTACCAATAAGCAGCATAATAAGGGTTTGTCTGTAAACCAACAGAAGACAGCACAATTAGAAAAAACACGCAGCAAAGGAGTGCTATATAGTGGTCAATCTTCTAGGGGATGCTCAAAGGATCAGCAAGAATTTAAGGATGTATTTGAGGTCTCGGAGATTCCAAAGGTAGAGAGCCCTAGGTATCCATCACAGGGGTGTGCAGACTTGATGAGCACTGATGCTGAAATTTCATTCATTGAACAGAAGTTCATGGATGCCAAACGACTTGCAACTCATCAAGATTTACAGTCTTCAAAGGATTTCTGTGACACACTCGAGGTTTTGGACTCTAACAAGGATCTTCTGCTAAAATACTTTAAGCGGCCAGATTCTTTGTTTAAAAAGCATCTAAATGATCTTCAAGCTGCTCCTATCCAATCACATTATGGTCATGTAGAAGCTATGGATATTGAGAAGTATGATCATGACTTCAATTTGATGTCAGATGGGGAGAAAACACGGTTGAACTACAATAGATCATCTCATGAGAAGCATCATGATGGTTATCCTTGTGATCTTGACAAAAGACATGTGATGCATATTTCACCAAAATCATCAAAGCTTCTATTTAAGGGTACATATGAGCAAAAGGCAGTCACCTCGCAGATTGTCCTCTTGAAACCTAATCTTGGAAAAGTGCAGAATGGTACCAGAATTGTGTCATCACCTTGTTCTTCACACAATTTTCTGTCAGGGCGTGAAAATGACACTGAACTGTGTCAACCGACAAATTTGCCTGAAAGTGCCATGTCTTGGAGGCAGGATTCTTTTGAATCTAGAGAAATTGCAAAGGAAGTCACTAGGCAAATGAAAATTAGTCTTCACAGTGGTGGCATGAAGCTTTCCACCTCTAGAATTAGAGGATATGCTGGGGATGATAGTTCATGTAGTGTTTCTGGGAATGAATCTCCTGAGGAGTCTGAGGAAACAACTGCAACTTTGGGAAATTCGATTGACTTAAACAACCGTAGCAGGCGATCATCCCGATCTAGTGAATCTTCTGTCAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGACACATAAGTCTCAAGAGCTGCAAGGCATCAGCAGGAGCAACACACTGGCTGAAATGCTTGCCGTCCCTGACAAGGTATTGAAGGCTGCTAATTCATACAGCATGGCTAGTGGGGAAGGTTTCCATGATAAATTTACTCCCAATAGTCAACCTTCTAAGTGGGTTGAACCATTGGGTATCAGCAGCAGGGATGGTTGGAAGGACGGATGCATTGGTAGTCTGTCGAGGTCAAAATCCCTTCCTTCTTCATCTGCTGCTTTTGGAAGTCCTAGAAGATTCATGCGCACTGAAGCACTTCTTGATGAGCGATTTATGGTGCCAAAGGAAGCTCACAGATGTGAGAGGAGAAGATCTGGTCACAAGAAGTCTAGGTCTTTGCATTCATCAATTCCCAATAAATTGAAAATCAGTCTCAAAGATTCTCCCAAGCTTGAGGTTCTAGCTAGTGAATCTTTATCTGAGATTGTAAGAGATGCGGTTGATGATGATGTGACAAGTGAAAGTAAAGTTGGGTCTGAACCTTCTACTAAGGTGCTTCCTGAATCATCTTCTCACCTTTTGACAAAAGACAACAGTAGTGCAGACCTAGACAATTCAATACACCAGGATCTATCAGCTGGGTCATCTGGTGGAAGTTCAGTCCTCAATGAACCTCCCGTTCGTGTTCCTGGACTTGAAGCTTCTTGCTGTAAAGATGCTGATCAGCCCAGTCCTGTCTCAGTCCTGGAGTCTTCTTTTACAGATGATGTGTCATCTTGTTCTGATTGTTTTGAAAGTTTGAACAATGACCTACAAGGGCTTCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGATGAATATGTGGAGGGGCCCATGGTAGTAAGTGATGAAGATGGTGGGGAAGCATCTACTGGAATGCTAGAAGACAAAGGATTACGTAGGACTGAAGATAGCTGGGAGTGTTCCTACATTATTGATGTCTTGTCTGAATCTGGCATCGATGGAGCTCAGCCAGATACAATTTTGGAACTTTGGCATTCCCTAGAATGCCCTGTGAGTCTTTCTGTTTTTGATGAGCTTGAAAAGAGGTATGGTGATTGGACTACTTGCTCAAGGTCTCAAAGGAGATTGCTTTTTGACCGTATTAATTTGGGAATTGTCAAGATCAATGAGCAATGCACTCATGCACTACCATGGGTGGGTCCAGTGACCGCAAATGTTATTGGTTCTAATTTGAACAAGAACGGGTTTCGAGATGGCCTTCTGAGGATGTTAGTGAGAGAAGGAAAAGTGAAGGGTGATGCTCTGGGGAAGGTGCTGGTTATGGAATCAGAGTGGCTGGACTTGAGAGATGACATTGATGTCGTAGGCAGGGAAGTTGAGAGAATGTTGTTAGATGATTTAGTGTCAGAGATAATCGGTACTTAG 2832 0.434 MDKSRHSKSKAAPCSTHQPQLPLPQGQGNKEVHRQRQPLNLLSPDSGSSSGGVADKDSFSSKFGWRSTKQLFGTPIKKLLAEEMSPRAESKRRSPGVIAKLMGLDGLPFQQPTNKQHNKGLSVNQQKTAQLEKTRSKGVLYSGQSSRGCSKDQQEFKDVFEVSEIPKVESPRYPSQGCADLMSTDAEISFIEQKFMDAKRLATHQDLQSSKDFCDTLEVLDSNKDLLLKYFKRPDSLFKKHLNDLQAAPIQSHYGHVEAMDIEKYDHDFNLMSDGEKTRLNYNRSSHEKHHDGYPCDLDKRHVMHISPKSSKLLFKGTYEQKAVTSQIVLLKPNLGKVQNGTRIVSSPCSSHNFLSGRENDTELCQPTNLPESAMSWRQDSFESREIAKEVTRQMKISLHSGGMKLSTSRIRGYAGDDSSCSVSGNESPEESEETTATLGNSIDLNNRSRRSSRSSESSVSREAKKRLSERWKMTHKSQELQGISRSNTLAEMLAVPDKVLKAANSYSMASGEGFHDKFTPNSQPSKWVEPLGISSRDGWKDGCIGSLSRSKSLPSSSAAFGSPRRFMRTEALLDERFMVPKEAHRCERRRSGHKKSRSLHSSIPNKLKISLKDSPKLEVLASESLSEIVRDAVDDDVTSESKVGSEPSTKVLPESSSHLLTKDNSSADLDNSIHQDLSAGSSGGSSVLNEPPVRVPGLEASCCKDADQPSPVSVLESSFTDDVSSCSDCFESLNNDLQGLRMQLQLLKLESDEYVEGPMVVSDEDGGEASTGMLEDKGLRRTEDSWECSYIIDVLSESGIDGAQPDTILELWHSLECPVSLSVFDELEKRYGDWTTCSRSQRRLLFDRINLGIVKINEQCTHALPWVGPVTANVIGSNLNKNGFRDGLLRMLVREGKVKGDALGKVLVMESEWLDLRDDIDVVGREVERMLLDDLVSEIIGT* 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0396 943 MobiDBLite consensus disorder prediction 636 692 - -
Gso10g0396 943 MobiDBLite consensus disorder prediction 108 146 - -
Gso10g0396 943 MobiDBLite consensus disorder prediction 415 454 - -
Gso10g0396 943 MobiDBLite consensus disorder prediction 584 608 - -
Gso10g0396 943 MobiDBLite consensus disorder prediction 588 602 - -
Gso10g0396 943 Pfam Domain of unknown function (DUF4378) 789 939 IPR025486 -
Gso10g0396 943 MobiDBLite consensus disorder prediction 455 474 - -
Gso10g0396 943 MobiDBLite consensus disorder prediction 1 60 - -
Gso10g0396 943 MobiDBLite consensus disorder prediction 415 474 - -
Gso10g0396 943 MobiDBLite consensus disorder prediction 109 146 - -
Gso10g0396 943 PANTHER AFADIN 26 941 - -
Gso10g0396 943 Coils Coil 731 751 - -
Gso10g0396 943 Pfam DUF761-associated sequence motif 90 109 IPR032795 -
Gso10g0396 943 PANTHER AFADIN 26 941 - -
Gso10g0396 943 MobiDBLite consensus disorder prediction 643 689 - -
Gso10g0396 943 Pfam Protein of unknown function (DUF3741) 192 236 IPR022212 -
Gso10g0396 943 MobiDBLite consensus disorder prediction 11 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0396 Gso-Chr10 4196068 4201956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0396 69 941 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 36.957 1.96e-139 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0396 - - gmx:100797413 1806.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1453 19 43402400 43409128 Gso10g0396 10 4196068 4201956 PCT
Gso3g1465 3 40629774 40635747 Gso10g0396 10 4196068 4201956 PCT
Gso10g0396 10 4196068 4201956 Gso19g1453 19 43402400 43409128 PCT
Gso10g0396 10 4196068 4201956 Gso3g1465 3 40629774 40635747 PCT