Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0390 ATGTCTTTCCACAATCGAGCATTTTGGATGGGGAAGAGTCCTGAGGGTTTGAATGATGGTGACATGACAAAGGATTCTTCTAGAATTGAGTCCAAGCGTGCTCATCAGTGGTTCATGGATGACCCTGAAGTGGATATGTTTCCCAATAAGAAACAAGCCGTAGAGGCTCCGAACAATTTGTTATCTGGAATGCTCAACTCCAATATTTCTTTGTGGGGAAATTCCTCAGGATTTCACTCTTTAAATGGTCATTTTACTGAACAGTTATTTGCCCCAGATGCAGCAACTATGAGTTTTGAAGACACAAACACCCCCTCTGTTAGCATAGATGATAAGTTGAGTGTGGAAAGAAAGGATAACGTGGATCGCTTTGGGAGTGAGTCCTCTTTTGGTTTATCCATCTCAACTGCATTAGAAGATCCTCATTTAGTTTTTAATTATGATGGAATTAGAAAAGTCAAATTTAACGAGGTGAAGGAATCTGAGAATGTCATGCCTGTTACTACAAATAATCCCTATGATAGGGGTGTTAGTGACAGTGTCTCAAATCCTTGTCTATACAAGGAGGAGGATAATTCCATATCAACGAGTCATGCCTACAATGAAGAGGTTGCCAATATAATAACAATGGATGGCACATATGACAGGACAGATAACAATTTCATGCCAATGAGTCAATCCTTTAACAAGGGAAATGGCAGCTTATCTATACATCCAACGTTCAATGAGATTTGTAATACGATATCAATGGATCTTGGTTTCAGTAAGGTAGATAGTAATGTAACATCTATTGCTCAAGGTTACAACAAGGTCTATGGCAATTCCGTGTTAACTAACCCCTTATTCAAGCAGGGAAATGATGTGCCATTTGTTTCACATTCCTATAATAATGGAGAGAGCACTATCATATCCTTTGGTGGCTGTGACGATGATACAACTCCCTCTGACTTATTCATTTCTGACTATGATCTGTTGATGTGTGAAGCACTTTCACATAAGTCAGAAGCTGTGAATGTGAAAGAGTTGGCTAGATCTAGTTCAAATTTACTTCCAAGTACAGCTCAGACATCTGCACCTGAAACTGAAAATGTTCCCAAGTCAAAAGGGGAGATAAAAATGTCTAGAAAAGCAACTTCAAACAACTTCCCTTCAAATGTCAGAAGTTTGCTATCCACTGGTATGCTGGATGGTCTCTCAGTAAAGTATAAGGCATGGTCACGGGAGGAACTCCGAGGTGTTATAAAAGGTGCTGGCTATTTGTGCAGTTGTCACTCATGTAATTTTTCCAAGGTTATTAATGCATTTGAATTTGAGCGACATGCTGGTTGCAAGACAAAACACCCCAATAATCACATTTACTTTGATAATGGGAAAACTATATATGGGGTTGTACAAGAGCTCAGGAGCACTCCGCAGAGCATGTTGTTTGAAGTTATTCAGACTATAACTGGTTCACCTATCGATCAGAAATCCTTCTGCATTTGGAAAGAATCTTTTTTGGCTACAGCAGGGAACTCCAACAACGCATATGTGCAAAACAAGAAGTAA 1548 0.3934 MSFHNRAFWMGKSPEGLNDGDMTKDSSRIESKRAHQWFMDDPEVDMFPNKKQAVEAPNNLLSGMLNSNISLWGNSSGFHSLNGHFTEQLFAPDAATMSFEDTNTPSVSIDDKLSVERKDNVDRFGSESSFGLSISTALEDPHLVFNYDGIRKVKFNEVKESENVMPVTTNNPYDRGVSDSVSNPCLYKEEDNSISTSHAYNEEVANIITMDGTYDRTDNNFMPMSQSFNKGNGSLSIHPTFNEICNTISMDLGFSKVDSNVTSIAQGYNKVYGNSVLTNPLFKQGNDVPFVSHSYNNGESTIISFGGCDDDTTPSDLFISDYDLLMCEALSHKSEAVNVKELARSSSNLLPSTAQTSAPETENVPKSKGEIKMSRKATSNNFPSNVRSLLSTGMLDGLSVKYKAWSREELRGVIKGAGYLCSCHSCNFSKVINAFEFERHAGCKTKHPNNHIYFDNGKTIYGVVQELRSTPQSMLFEVIQTITGSPIDQKSFCIWKESFLATAGNSNNAYVQNKK* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0390 515 PANTHER AUTOIMMUNE REGULATOR 5 514 - -
Gso10g0390 515 Pfam Tify domain binding domain 412 467 IPR032308 -
Gso10g0390 515 PANTHER PROTEIN, PUTATIVE-RELATED 5 514 - -
Gso10g0390 515 MobiDBLite consensus disorder prediction 348 379 - -
Gso10g0390 515 MobiDBLite consensus disorder prediction 348 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0390 Gso-Chr10 4128020 4131759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0390 363 499 PHD Transcription Factor Family AT3G53680 54.348 1.73e-41 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0390 - - gmx:100794765 1036.56