Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0388 ATGGAGACACAAAATTGGTTCGAGAGATTGAAGCCTTTCGCAGCTGTGGTATCAATACAGTTTGGATATGCAGCTATGGATGTTCTATCAAAGGCTGCAATGAACAAAGGGATGAGCAATTATGTGTTTGTTGTTTATCGCCATGCTGTTGCATTCTTTGTTATGGCCCCTTTGGCATGGTTTTTTGACAAGAAAGTAAGGCCAAAGATGACATTGTCAATTTTCATGAAGATAGCGGTGCTCAGCTGGATAGAGCCAGTTATTGACCAGAATTTGTATTTTTTGGGGATGAAGTACACAACAGCAACCTTTGCCGTTACCATAACCAATATGCTTCCTGCCATTACCTTTATCTTCGCATGCATTCTTAGGCTTGAGAAGATTAAAATAAGAAGTATACGGAGCCAAGCAAAGGTGGTGGGAACCCTAACAACTGTTTCGGGAGCCATGGTCATGACACTCCTGAAAGGGCCAGTACTTTTCGGGTCACACGGAAGCAATGATCACAGCCAGCATAATGGGACAAGTATGCGACATACAATAACAGGATTCATATTGATCACAATTGGATGCTTTTGTTGGGCTTGTTTCGTGATCCTACAAGCTACTACCCTTAAAACCTACCCTGCTGAACTCTCTCTTTCTGCTTGGATATGCTTAATGGGCACAATTGAAGGTGCCGCAGTGGCTATGATTATGGAAAGGGGCAACCCTTCAGTTTGGTCTCTAAAATTGGACATGAAACTGCTATGTGCTGTCTACTCTGGTATAGTGTGCTCAGGAATGAGCTATTACTTGCAAGGAGTAGTGATGAAAACTAGAGGCCCAGTCTTCGTAACAGCATTTAGTCCCCTCTGCATGGTAATCGTGGCTGTCATGAGCTACTTCATTCTGGCCGAACAAGTGTTCCTTGGAAGGGTGATCGGTGCCGTTATCATTTGTTTGGGCCTATATGCTGTGGTGTGGGGCAAAAGCAAAGATTGTAGCCCACGAAGCCCAAATACTCAAGAGCCCATATTACTGGCAAAGCAAATAGTAAATGAGGACAATGCTAAGAAGGAAAATTGCAATTGCACTCACGAAGTCATCAACGCCAACAATTTTGAAAATGGAATCACTAGAAACGAAGAACAAGTGTGA 1140 0.4316 METQNWFERLKPFAAVVSIQFGYAAMDVLSKAAMNKGMSNYVFVVYRHAVAFFVMAPLAWFFDKKVRPKMTLSIFMKIAVLSWIEPVIDQNLYFLGMKYTTATFAVTITNMLPAITFIFACILRLEKIKIRSIRSQAKVVGTLTTVSGAMVMTLLKGPVLFGSHGSNDHSQHNGTSMRHTITGFILITIGCFCWACFVILQATTLKTYPAELSLSAWICLMGTIEGAAVAMIMERGNPSVWSLKLDMKLLCAVYSGIVCSGMSYYLQGVVMKTRGPVFVTAFSPLCMVIVAVMSYFILAEQVFLGRVIGAVIICLGLYAVVWGKSKDCSPRSPNTQEPILLAKQIVNEDNAKKENCNCTHEVINANNFENGITRNEEQV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0388 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 150 - -
Gso10g0388 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 325 - -
Gso10g0388 379 Pfam EamA-like transporter family 21 133 IPR000620 GO:0016020|GO:0016021
Gso10g0388 379 Pfam EamA-like transporter family 182 321 IPR000620 GO:0016020|GO:0016021
Gso10g0388 379 PANTHER WAT1-RELATED PROTEIN 8 346 - -
Gso10g0388 379 PANTHER WAT1-RELATED PROTEIN 8 346 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0388 Gso-Chr10 4123023 4127987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0388 1 378 Nodulin-like Gene Family AT2G37460 60.000 1.20e-161 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0388 - - gmx:100813408 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1445 19 43325551 43328932 Gso10g0388 10 4123023 4127987 PCT
Gso3g1455 3 40546054 40548992 Gso10g0388 10 4123023 4127987 PCT
Gso10g0388 10 4123023 4127987 Gso19g1445 19 43325551 43328932 PCT
Gso10g0388 10 4123023 4127987 Gso3g1455 3 40546054 40548992 PCT