Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0378 ATGGCTGATTCCACTCCCACTGCAACTCCTTCAAACGACACCGTATCATCCTATTTCCAACGAACGGTCACTTTGTACGATTGGTGGTTGATTAAAGCCAAAAACGACTTCCAAGGAAAGCGTTTAGCCGTCGCTGGTGTCTCGTCGAGAAAGGATGAGGCAATGCGCGTGTTTGTTTCTGCTGCTGTTATCAAAAGATATGACGTGTTTTCTCTCGAGACTGCAGACGGGATATGCGTCATGATCAGTGGATTCATCAATGAGCAGCGCACTCTCGAAAATGGTTTTGCCGCTGAGGTTTTCAACCGTTTTTTATTTGGCTTTCCTCCAGACTGGGAAAGCTATGCTCTAGATTGCTTCAGAGAAGAATCTACCACTGGCACTGATTTAGGTAGTGCTGTTCCTGATAATGTACCAGCTAGTTCTCTAGAAATTTTATCTGATGGCGTGGAAAATTCCATTCCTACTTCTTTGGCATCACCAAAGGAGGCCCCGGGAGATCACGAGAAGTCATTCCCTGGAAATGAATGCAATGTGTCAAAGGAGATGGGTGGGGTTAATGTTGCTTGTAGTAGTGGTGGGAAAAGACGTAGTGCCAGGTTGCATGATATTAAAGTACACCAGCAGAAGAAGAAGCCTGCTTCTGGAGGGTCTCTGAAGAATCCAAATAATGAGAACTCTACGATAGTGGCCTTAGAGAATTGTGATGTAGAGGGACTGAAAAGTCCGGTGACACCCATTCAGTCACAATCATCAAGACAACTAAGCACATCACCTGGGCAGCTAGTTAAAAAATCTGCATCCAGAATTTCTAGAACATTGTCACCAAAGACTGAAGGCTGTTATAAGAAAAAGAGAGTGACAGTTGAAAGAAAAGTGGGCAGGCCTAAGGGAAAACTAAATAAATCTGCATCTGCTGTGAAAAATCCGCAAGAAAAGGATCTAAGCCACTTGACCAAGGGAAGCCAACAGAAAATATCCACAGTTACTCCAGAGTCGCCGAGTTTCAGAAAATCCAGATCCGGTAGGTTGCTTCTACCTCCCTTAGAGTTTTGGCGCAATCAAATACCAATTTATAATGCGGACCACGAGATTACAGAAATTCAGGATGGTGCATCTCTGATATCACCTTGTAAAGGTTTTTCACCATCATTGAGTAGGTTTAGCAATCAGAAACGTGGAGCGTGA 1188 0.4402 MADSTPTATPSNDTVSSYFQRTVTLYDWWLIKAKNDFQGKRLAVAGVSSRKDEAMRVFVSAAVIKRYDVFSLETADGICVMISGFINEQRTLENGFAAEVFNRFLFGFPPDWESYALDCFREESTTGTDLGSAVPDNVPASSLEILSDGVENSIPTSLASPKEAPGDHEKSFPGNECNVSKEMGGVNVACSSGGKRRSARLHDIKVHQQKKKPASGGSLKNPNNENSTIVALENCDVEGLKSPVTPIQSQSSRQLSTSPGQLVKKSASRISRTLSPKTEGCYKKKRVTVERKVGRPKGKLNKSASAVKNPQEKDLSHLTKGSQQKISTVTPESPSFRKSRSGRLLLPPLEFWRNQIPIYNADHEITEIQDGASLISPCKGFSPSLSRFSNQKRGA* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0378 395 MobiDBLite consensus disorder prediction 278 297 - -
Gso10g0378 395 MobiDBLite consensus disorder prediction 243 275 - -
Gso10g0378 395 MobiDBLite consensus disorder prediction 320 337 - -
Gso10g0378 395 Pfam SANTA (SANT Associated) 23 115 IPR015216 -
Gso10g0378 395 PANTHER MIS18-BINDING PROTEIN 1 12 255 IPR039110 -
Gso10g0378 395 PANTHER MIS18-BINDING PROTEIN 1 184 387 IPR039110 -
Gso10g0378 395 MobiDBLite consensus disorder prediction 154 178 - -
Gso10g0378 395 MobiDBLite consensus disorder prediction 205 225 - -
Gso10g0378 395 MobiDBLite consensus disorder prediction 241 340 - -
Gso10g0378 395 PANTHER MIS18-BINDING PROTEIN 1 12 255 - -
Gso10g0378 395 PANTHER MIS18-BINDING PROTEIN 1 184 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0378 Gso-Chr10 4028790 4033842 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso10g0378 SANTA 4.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0378 - - gsj:114370329 789.645