Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0365 ATGCAGATGCTCATAGACAAAGAAATGTCCAAACAAAAAGACTCAAAGCACAACCTACCAAATGTAGTAGCAAAGCTAATGGGGCTTGAAGCCCTTCCAAAGGGAGAGCCTAATTTATCAATGGAAAGAAGTCACAGGAGAGACTATTCTCAACAAATGTATGGTCCTATAGGCTTACCATTCAAGCATTGGCAGCAGGAAGATAGGTTTATGGATAGGGAAATGCTTCATGAAGTTCATCCAAGCACAGAACATGTTGCTGACAAAGATATGTATGAAATATGGCAGCAAACTCAGAGAGGAAGGTTTAGTGAAGATGTTGATGGGAAAAGAATGGCTCTAATTCGTCAGAAATTCATGGAAGCGAAACGTCTGTCAACAGATGAGAGACTGCGCCAATCCGAGCAATTCAAAGATGCATTGGAAGTTCTAAGCTCCAATAGTGATCTCTTGATCAAGTTATTGGATTCTCAAAATGTTTGTGATTTATACTCAACTTCACCTAATGAGACAAAGCGCATTACTCTTATTAAACCTTTGAAGATGGTTGACAATGACAAATGTGCCAGAAAGGAGAAAAAGAACAATAGACTGATTAAGAAACCATCAAGTGTTGATCAAGAAAATCCTGGAAACTCTCCAGATAATCAGAAAGTTGATGAATCTCCGGTCCTAACCACTCGAATAGTGTTGCTAAAGCCTAGCCCTTGGAGGACACCTGAGCAAAAGGCTGTGGTTTCTCCAACAACATCATCATCGCCATTGAATCTGAAAAGTGGAAATTTCCATCAGGGACCTGAATATGATGATGTACTAGAATCCATTAGAGTGGCAAATGAGGTCACACAGCAAATGCATAAAGGCCTGAGGAGCTATCAGAAGGATAAAACTTCATACTCTTCAGTGTTTTCCAATGGCTATTCTGATGATGAGAGTTCATTCAACAAATCATATCACGAGTATGCATCCGCGAATTTCAGCGATTTAGAAGCCACGTCAATGTCACCATTGCCAAGGCTTTCATGGGATTACAATTACGTCAATGGCTGTGGTGGCAGTCCTTATTCTACAATGTCGTTGGGCCGTGTCCCGTGCTCTCCTGAGTCATCGGTGTGCAGAGAGGCTAAGAAAAGACTTTCAGAAAGATGGACTATGATGACATTAGATAACAAGGGTCATCAAGAACAAAGACAAGCAAGAAAGAAAAGCTCTACCTTGGGTGAGATGCTTTCTCTTACCCACAAAAAGAAATCCTTAACACCTGAGGTTGAAATTATTGTTAATGAGGAACAAGAACCTGGCAAATCTGTTTCTTGCAGCCATTCTTTCAATGCAGAAACAAGCATTGAAGGTTCTCCTAAAAATCTCCCCAGGTCAAATTCTGTGCCTGCATCTTCTACTGTCTATGAAAATGGCCTCACAGTTGTAGTAAATGATCATAAGAACACTGGCAAAGCACAAGGCTCCAAGGTGCAGAAAAAGTCTAAGAGTGTGAGATCATCATTTAAAGGGAAAGTTGCAAGTTTTTTGTTTTCAAGGAGTAAGAAATCATCAACCAAGGAAAAAACAAGTTCATCTCAATCTAAAGATGAATCCAAATCTACTTCTACTGTCACTGAAACATTAGTTCTTCCAGCAAATTCACTTGGAGTCCTTAGGAGTGATGTGTCTCAAAGCATCAACGTGGATGGTTTTGAAGAGTGTTCTCTTGCAGCTCTATGTGAATCATCAGGAAAAAATTCAACAGATTCAGTCTCGAATGAACAAGAAGAAGACATGATTACACTAGAGCCTGGATTGACTATGCCAAGACCGATGGTGCCAGAGATTCATTCAAGCGGAAACCCGGATCAGCCAAGTCCAATCTCAGTGTTACAACCTCCATTTGAAGATTTTAATAATAATGCATCACATGAGTCCTTGGACTGTATGAAGAGTGGTGACCAGGGATCAGAGGTGCCACTGAAGTCCAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTAGGACCCTATCATGGGATATTGATTCTAGTGCAGAAGTGGCAAGCCCCTATGCATTAAAACCCTTAATGGTTTCTTCCTTGGACTCCAAGGTAGATGATCAAGAGTGGCTTCTCTTGGTCCACAAACTACTATCAGCAGCTGGACTTGATGATCAACACCAATTTGACTCGTCTTACACTAGATGGCATTCCCTTGAGAGCCCATTGGACCCATCACTGAGGGACACATTATATGCCAATCTAAATGAGAAGGAGCCTCAGCCAAATATGCATGAGGGCAGAAGAAGGAGGATGAGATCAAACCATAAGCTTGTGTTTGACTATGTCAATGATGCACTATTGGAACTTGTTGGTTATGGGTCAGAAAAGTGCTTAAAGAGAAGTGGGAGCCGCTGCAGAGTCCTAGTCCAAGAGGGTGCATCAGCATCAGCAACATCATCTCCCTTATCGGTGGACCACATTGTGGCCCAAATGAAGGAATTAAGAGCAAGTGGGATGAGGTGTGAGTGGGAAAATGGTGGTGGGAACAGCACCAGCCTGGTGGTAGAAAATATTGTCAGAAAAGAGGTTGTGCAAATAGGGTGGGTTGAGCTTACGGATTTGGAGATTGATATTTTAGGGAAGGAGATTGAAGGGGACTTGATTCAAGAGCTTGTGGAGAATGCAGTGGTTGATTTATTAAATTAA 2697 0.4149 MQMLIDKEMSKQKDSKHNLPNVVAKLMGLEALPKGEPNLSMERSHRRDYSQQMYGPIGLPFKHWQQEDRFMDREMLHEVHPSTEHVADKDMYEIWQQTQRGRFSEDVDGKRMALIRQKFMEAKRLSTDERLRQSEQFKDALEVLSSNSDLLIKLLDSQNVCDLYSTSPNETKRITLIKPLKMVDNDKCARKEKKNNRLIKKPSSVDQENPGNSPDNQKVDESPVLTTRIVLLKPSPWRTPEQKAVVSPTTSSSPLNLKSGNFHQGPEYDDVLESIRVANEVTQQMHKGLRSYQKDKTSYSSVFSNGYSDDESSFNKSYHEYASANFSDLEATSMSPLPRLSWDYNYVNGCGGSPYSTMSLGRVPCSPESSVCREAKKRLSERWTMMTLDNKGHQEQRQARKKSSTLGEMLSLTHKKKSLTPEVEIIVNEEQEPGKSVSCSHSFNAETSIEGSPKNLPRSNSVPASSTVYENGLTVVVNDHKNTGKAQGSKVQKKSKSVRSSFKGKVASFLFSRSKKSSTKEKTSSSQSKDESKSTSTVTETLVLPANSLGVLRSDVSQSINVDGFEECSLAALCESSGKNSTDSVSNEQEEDMITLEPGLTMPRPMVPEIHSSGNPDQPSPISVLQPPFEDFNNNASHESLDCMKSGDQGSEVPLKSNLIDKSPPIESIARTLSWDIDSSAEVASPYALKPLMVSSLDSKVDDQEWLLLVHKLLSAAGLDDQHQFDSSYTRWHSLESPLDPSLRDTLYANLNEKEPQPNMHEGRRRRMRSNHKLVFDYVNDALLELVGYGSEKCLKRSGSRCRVLVQEGASASATSSPLSVDHIVAQMKELRASGMRCEWENGGGNSTSLVVENIVRKEVVQIGWVELTDLEIDILGKEIEGDLIQELVENAVVDLLN* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0365 898 Pfam Protein of unknown function (DUF3741) 116 159 IPR022212 -
Gso10g0365 898 Pfam DUF761-associated sequence motif 20 34 IPR032795 -
Gso10g0365 898 MobiDBLite consensus disorder prediction 445 465 - -
Gso10g0365 898 MobiDBLite consensus disorder prediction 480 495 - -
Gso10g0365 898 Pfam Domain of unknown function (DUF4378) 710 890 IPR025486 -
Gso10g0365 898 MobiDBLite consensus disorder prediction 202 223 - -
Gso10g0365 898 MobiDBLite consensus disorder prediction 390 414 - -
Gso10g0365 898 MobiDBLite consensus disorder prediction 514 538 - -
Gso10g0365 898 MobiDBLite consensus disorder prediction 187 201 - -
Gso10g0365 898 MobiDBLite consensus disorder prediction 187 223 - -
Gso10g0365 898 MobiDBLite consensus disorder prediction 240 264 - -
Gso10g0365 898 MobiDBLite consensus disorder prediction 242 260 - -
Gso10g0365 898 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 896 - -
Gso10g0365 898 MobiDBLite consensus disorder prediction 480 499 - -
Gso10g0365 898 PANTHER DUF3741 FAMILY PROTEIN 1 896 - -
Gso10g0365 898 MobiDBLite consensus disorder prediction 612 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0365 Gso-Chr10 3865961 3870839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0365 1 896 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 37.339 5.53e-129 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0365 - - gmx:100814302 1727.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1421 19 43128447 43133879 Gso10g0365 10 3865961 3870839 PCT
Gso3g1429 3 40295994 40301562 Gso10g0365 10 3865961 3870839 PCT
Gso10g0365 10 3865961 3870839 Gso19g1421 19 43128447 43133879 PCT
Gso10g0365 10 3865961 3870839 Gso3g1429 3 40295994 40301562 PCT