Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0360 ATGGCTGCCACTGCCAATCCTATAATTGGTTCCCGTGTTTGGGTGGAGGATTCTCAAATAGCTTGGATAGATGGTGAGGTCCTGGAGGTTAAGGGAGAAGAAATCAAAGTCCTTTGCACTTCAGGGAAGACGGTTGTTGTTAAAGCTTCTAGTGTTTATCATAAAGATACCGAAGCCCCCCCATGTGGAGTGGATGATATGACAAAACTTGCTTATCTACATGAACCTGGTGTCCTGGATAATCTGAGATCAAGATATGATATCAATGAAATTTATACTTACACCGGGAATATATTGATTGCTGTGAATCCTTTCATAAAGCTTCCTCATTTATATGACAGCCATATGATGGCACAATATAAAGGAGCAGGTTTTGGTGAGCTAAGTCCACATCCTTTTGCTGTTGCAGATGCAGCATATAGACTCATGATTAATGAGGGAATCAGCCAGTCAATATTGGTTAGTGGTGAAAGTGGGGCTGGGAAAACAGAAAGCACCAAGTTACTCATGCGCTATCTTGCTTACATGGGAGGGAGAGCTAATAATGCTTCTGAAGGTAGATCTGTTGAGCAGAAAGTCCTGGAGTCCAATCCCGTTTTAGAAGCCTTTGGCAATGCAAAGACTGTTAGAAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAATTTGACCAGAAGGGAAGGATTTCTGGGGCTGCTATCAGAACTTATCTGCTGGAAAGATCACGTGTTTGTCAGTTGTCAGATCCAGAGAGGAACTATCACTGTTTCTATATGCTCTGTGGTGCACCTCCGGAGGATATTCAGAAGTACAAATTAGGAAATCCTAGAACATTTCATTATCTGAATCAAACAAATTGCTTTGAGTTGGAAGGGGTTGATGAGCTAAAAGAATATCGGGATACGAGGAGAGCAATGGACGTTGTTGGAATAAGTTCTGAGGAGCAGGAAGCAATATTTCGAGTGGTTGCTGCAATTTTGCATCTTGGCAACATTGAATTCACAAAAGGGCAAGAAATGGACTCATCTGTGCCCAAAGATGAAAAATCTTGGTTTCATCTACGAACTGCTGCCGAACTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGTAAGCGTGTAATTGTTACTCGAGATGAAACTATAACAAAATGGCTGGATCCAGAAGCTGCTGCACTCAGCCGAGATGCTTTGGCTAAGATTGTCTACACGAGGCTGTTTGATTGGCTGGTGGATAAAATTAATAATTCAATTGGTCAGGACCCTGACTCAAAGTCCTTAATTGGTGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATCAATTTGACCAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAAGAGGAGATTGATTGGAGTTACATTGAGTTTGTTGATAATAAAGATGTTCTGGATCTCATTGAAAAGAAACCTGGTGGCATTATTGCTCTTCTTGATGAAGCTTGTATGTTTCCTAGATCAACACATGAAACTTTTGCCCAAAAGCTGTATCAGACATTCAAAAACCATAAAAGGTTCAGCAAACCCAAATTGGCACGTAGTGACTTCACAATTTGCCATTATGCGGGTGATGTCACATATCAAACTGAATTGTTCCTGGACAAGAACAAAGATTATGTTGTTGCAGAACACCAGGCACTTCTTTATGTTTCCAAATGCCCTTTTGTGTCTGGTTTGTTCCCCCCTTCACCTGAGGAATCGTCCAAACAATCGAAGTTCTCTTCAATAGGTTCCCGGTTTAAGCAACAATTGCAAGCACTACTTGAAACTCTCAGTGCCACTGAGCCACACTACATTCGCTGTGTTAAACCCAATAATCTTCTTAAGCCAGCAATTTTTGAGAATAAAAATGTTTTGCAGCAACTGCGATGTGGGGGAGTTATGGAGGCAATTAGGATAAGCTGTGCCGGGTATCCCACTAGGAAAACTTTTGATGAATTTGCAGATCGATTTGGACTTCTTGCACCTGAAGCTTTGGACGGGAGTTCTGATGAGGTCACTACTTGCAAGAAGATTCTGGAGAAGGTTGGACTTAAGGGCTATCAGATTGGTAAAACAAAAGTGTTTCTTCGAGCTGGTCAAATGGCAGATCTAGATACTCGTAGAAGTGAGGTCTTAGGAAAGTCAGCAAGCATTATTCAGAGGAAAGTTCGTACTTATTTGGCCCGCCGTAGTTTTTTCTTGATACGTTTGTCTGCTATACAGATTCAAGCTGCATGCAGAGGACAACTTGCTCAGCAAGTTTATGAGGGATTGCGGCGGGAGGCTTCTAGTCTGATGATTCAGAGGTATTTCCGCATGCATGTTGCTAGGAAGGCATATAAAGAATTGTATAGCTCAGCTGTTTCTATTCAGACTGGTATGCGAGGGATGGCTGCTCGTAGTGAGCTACGCTTCAGGAAGCAAACTCGTGCTGCTATTGTCATTCAGAGCCACTGCCGGAAATACCTGGCACAACATCATTTTACAAACTTAAAGAAGGCAGCAATTGCAACACAATGTGCATGGAGAGGAAAAGTTGCTCGGTTAGAATTACGAAAGCTAAAGATGGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTTGAAGACCTTACATTGAGGTTGCAGCTGGAAAAACGGCTGAGGATCAACATTGAAGAATCAAAAACACAAGAAAATGAAAAACTGCAATCTGCTTTGCAAGCGATGCAACTTCAGTTTAAAGAAACCAAGTTGTTAGTTCAAAAGGAGCGTGAGGCTGCAAAAAGAGAAGCTGAGAGAGCGCCTGTCATACAGGAGGTTCCTGTTGTTGACCATGCTTTGTTGGAGAAGCTCACTAGTGAAAATGAGAAACTCAAGACCTTGGTGAGTTCATTGGAAAAGAAAATTGATGAAACAGAAAAAAGATATGAAGAGGCAAACAAAATTAGTGAAGAAAGGTTGAAGCAGGCTTTGGATGCTGAATCAAAAATAATCCAGTTGAAGACTACTATGCAAAGGCTTGAAGAGAAATTCTCAGATATGGAAACTGAAAACCAGGTTCTTCGGCAACAGTCTCTGCTAAACTCATCTTCAAAAACAATGTCAGAGCACCTTTCTACCCACATATCTGAGAAGTTGGAAAATGGTCACCATGTGCTGGAAGATCAGAACAATGCTGAAGCACAGAGTGTCACACCTGTGAAGAAGTTTGGTACAGAATCTGATGGCAAATTAAGGAGATCCTTCATTGAACGTCAACATGAGAATGTTGATGCACTTGTCAACTGTGTTATGAAAAATATTGGTTTCCATCATGGAAAGCCTGTTGCTGCATTTACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAGGCTGAAAGAACAAGTGTATTTGATCGTCTTATCCAGATGATTGGTTCTGCAATTGAGAATCAAGATGACAATGATCTTATGGCCTATTGGCTGTCAAATTTGTCTGCACTATTGTTTTTGCTCCAGCAAAGTCTAAAATCTGGTGGTGCAGCTGATGCAACTCCTGTAAAGAAACCGCCAAATCCGACATCCCTATTTGGAAGAATGACTATGGGTTTCCGTTCATCCCCTTCTTCTGCCAACCTTCCTACCCCATCATTGGATATTGTACGCAAGGTAGAAGCTAAATATCCTGCTTTGCTTTTCAAGCAACAGCTCACAGCCTATGTGGAGAAAATATACGGTATCCTTCGGGACAACTTGAAGAAAGAATTGGCATCAATGCTTTCGTTATGTATACAGGCACCAAGAACATCTAAGGGAGTGCTACGATCTGGCAGATCCTTTGGTAAAGATTCTCCCATGGGTCATTGGCAGAGTATTATAGAATCCCTGAACACTCTCCTCTGTACTCTGAAAGAGAACTTTGTACCTCCAGTCCTTATCCAAAAGATCTTCACTCAAACATTCTCATATATTAATGTTCAACTCTTCAATAGTCTTCTTCTGCGTCGTGATTGTTGCACATTCAGCAATGGGGAATATGTGAAAGCTGGTTTAGCAGAATTGGAGTTGTGGTGCTGCCAAGCAAAGGAGGAGTATGCAGGTTCATCTTGGGATGAGCTTAAGCACATAAGGCAAGCTGTTGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCCTATGATGAAATCATTAATGATTTATGCCCAATCATGAGTGTCCAGCAGCTATACAGAATATGTACACTTTACTGGGATGCTAACTACAATACTCGAAGTGTATCGCCAGATGTCCTTTCAAGCATGAGAGTACTTATGGCTGAGGACTCTAATAATGCTCAGAGTGATTCTTTCTTGTTGGATGACAGTTCCAGCATCCCCTTCTCAGTAGATGACTTCTCTACATCACTGCAAGAGAAGGATTTCTCCGACATGAAACCAGCGGATGAGCTGCTTGAGAATCCCGCCTTCCGATTTTTAAATGAGTAG 4545 0.4121 MAATANPIIGSRVWVEDSQIAWIDGEVLEVKGEEIKVLCTSGKTVVVKASSVYHKDTEAPPCGVDDMTKLAYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFIKLPHLYDSHMMAQYKGAGFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRANNASEGRSVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCGAPPEDIQKYKLGNPRTFHYLNQTNCFELEGVDELKEYRDTRRAMDVVGISSEEQEAIFRVVAAILHLGNIEFTKGQEMDSSVPKDEKSWFHLRTAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPEAAALSRDALAKIVYTRLFDWLVDKINNSIGQDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNKDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLYVSKCPFVSGLFPPSPEESSKQSKFSSIGSRFKQQLQALLETLSATEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFADRFGLLAPEALDGSSDEVTTCKKILEKVGLKGYQIGKTKVFLRAGQMADLDTRRSEVLGKSASIIQRKVRTYLARRSFFLIRLSAIQIQAACRGQLAQQVYEGLRREASSLMIQRYFRMHVARKAYKELYSSAVSIQTGMRGMAARSELRFRKQTRAAIVIQSHCRKYLAQHHFTNLKKAAIATQCAWRGKVARLELRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRLRINIEESKTQENEKLQSALQAMQLQFKETKLLVQKEREAAKREAERAPVIQEVPVVDHALLEKLTSENEKLKTLVSSLEKKIDETEKRYEEANKISEERLKQALDAESKIIQLKTTMQRLEEKFSDMETENQVLRQQSLLNSSSKTMSEHLSTHISEKLENGHHVLEDQNNAEAQSVTPVKKFGTESDGKLRRSFIERQHENVDALVNCVMKNIGFHHGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENQDDNDLMAYWLSNLSALLFLLQQSLKSGGAADATPVKKPPNPTSLFGRMTMGFRSSPSSANLPTPSLDIVRKVEAKYPALLFKQQLTAYVEKIYGILRDNLKKELASMLSLCIQAPRTSKGVLRSGRSFGKDSPMGHWQSIIESLNTLLCTLKENFVPPVLIQKIFTQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPIMSVQQLYRICTLYWDANYNTRSVSPDVLSSMRVLMAEDSNNAQSDSFLLDDSSSIPFSVDDFSTSLQEKDFSDMKPADELLENPAFRFLNE* 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0360 1514 SMART MYSc_2a 57 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g0360 1514 Coils Coil 918 938 - -
Gso10g0360 1514 Pfam IQ calmodulin-binding motif 858 877 IPR000048 GO:0005515
Gso10g0360 1514 Pfam IQ calmodulin-binding motif 788 806 IPR000048 GO:0005515
Gso10g0360 1514 Pfam IQ calmodulin-binding motif 763 780 IPR000048 GO:0005515
Gso10g0360 1514 Pfam IQ calmodulin-binding motif 739 757 IPR000048 GO:0005515
Gso10g0360 1514 Pfam IQ calmodulin-binding motif 834 853 IPR000048 GO:0005515
Gso10g0360 1514 Pfam Myosin head (motor domain) 64 722 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g0360 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 789 885 IPR027417 -
Gso10g0360 1514 ProSiteProfiles IQ motif profile. 856 885 IPR000048 GO:0005515
Gso10g0360 1514 Gene3D - 254 312 - -
Gso10g0360 1514 ProSiteProfiles Myosin motor domain profile. 62 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g0360 1514 ProSiteProfiles Dilute domain profile. 1159 1460 IPR002710 -
Gso10g0360 1514 ProSiteProfiles IQ motif profile. 785 814 IPR000048 GO:0005515
Gso10g0360 1514 Gene3D - 668 735 - -
Gso10g0360 1514 Pfam Myosin N-terminal SH3-like domain 10 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gso10g0360 1514 PANTHER MYOSIN 7 1512 - -
Gso10g0360 1514 Coils Coil 974 1050 - -
Gso10g0360 1514 Gene3D - 835 884 - -
Gso10g0360 1514 Gene3D - 736 787 - -
Gso10g0360 1514 Gene3D - 788 834 - -
Gso10g0360 1514 ProSiteProfiles IQ motif profile. 760 789 IPR000048 GO:0005515
Gso10g0360 1514 Gene3D Myosin VI head, motor domain, U50 subdomain 314 603 - -
Gso10g0360 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 787 IPR027417 -
Gso10g0360 1514 SMART DIL_2 1335 1442 IPR002710 -
Gso10g0360 1514 Pfam DIL domain 1336 1439 IPR002710 -
Gso10g0360 1514 Gene3D Kinesin motor domain 65 664 IPR036961 -
Gso10g0360 1514 ProSiteProfiles IQ motif profile. 808 837 IPR000048 GO:0005515
Gso10g0360 1514 PANTHER MYOSIN-14 7 1512 - -
Gso10g0360 1514 SMART iq_5 832 854 IPR000048 GO:0005515
Gso10g0360 1514 SMART iq_5 784 806 IPR000048 GO:0005515
Gso10g0360 1514 SMART iq_5 736 758 IPR000048 GO:0005515
Gso10g0360 1514 SMART iq_5 855 877 IPR000048 GO:0005515
Gso10g0360 1514 SMART iq_5 807 829 IPR000048 GO:0005515
Gso10g0360 1514 SMART iq_5 759 781 IPR000048 GO:0005515
Gso10g0360 1514 Gene3D - 441 625 - -
Gso10g0360 1514 CDD MyosinXI_CBD 1110 1483 IPR037975 GO:0007015
Gso10g0360 1514 ProSiteProfiles IQ motif profile. 833 862 IPR000048 GO:0005515
Gso10g0360 1514 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g0360 1514 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g0360 1514 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g0360 1514 PRINTS Myosin heavy chain signature 431 459 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g0360 1514 PRINTS Myosin heavy chain signature 484 512 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g0360 1514 Coils Coil 879 913 - -
Gso10g0360 1514 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gso10g0360 1514 CDD MYSc_Myo11 76 722 IPR036018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0360 Gso-Chr10 3785004 3803227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0360 1 1513 Myosins gene family AT5G43900 75.494 0.0 2366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0360 K10357 - gmx:100791070 2946.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1419 19 43052043 43070332 Gso10g0360 10 3785004 3803227 PCT
Gso3g1427 3 40225275 40242431 Gso10g0360 10 3785004 3803227 PCT
Gso3g2119 3 46476851 46487856 Gso10g0360 10 3785004 3803227 PCT
Gso10g0360 10 3785004 3803227 Gso19g1419 19 43052043 43070332 PCT
Gso10g0360 10 3785004 3803227 Gso3g1427 3 40225275 40242431 PCT