Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0356 ATGCTTTTTTTGCCTTTGCGCACACTTGCTATGTCAATGTCGACTTCGCGTATCTTCCTCCTCGCTCTCCTTTTCTCTTTCTCAGTGAACTCGGTTTCTACGAATGTGCCATTTGCTTCAGCTGAACGAGCTAAAATGTGGTTAGTTAAACCTTCGTCTGGGCCATCTTTTGCTCCTGTGCAATCTCCATCTTATCAAGTTCCTATTGCGACTCCAAGACCACAACTTCCTCATTATCACCATCGTCACCACTGTGGGAAACCTTATGCTGCCGCTCCATCCCTTTCTAAAGACCAAGCTTGTAGCCAAATCTGTACAGATCCATTAACTGCAACTCCTTTTGGTTCACCTTGTGGTTGTGTATTTCCCATGAAAGTCAGACTAGTACTGGATGCGGCTCCTTTGGCTGTTTTTCCAGTAATTGATGAGTTAGAGATTGAACTCAGTTCTGGAACATATTTGAAGCAGAGCCAGGTGAGGATAATGGGTGTCACTGCTGACAGTCAAAATCAGGGAAAAACCACAATTGATATTTACTTGGTTCCACTTGGGGAAAAATTTGACAATACCACTGCAGTTCTGTTGTCTAAACGGTTTTGGCACAACGAAGTTCCTCTTAATAGGAGCCTTTTTGGTGATTATGCCATCTTGTGTATTACTTATCCAGGTATACCATCGCCTCGGCCACCTGAAACCTTAACTGGGAGAGGTCACATGCCCAGGGAGAGTATTAATGTTCTTCCAATTACTGCAGACATGAACAGCGAGAATGAGAAAATTAATCTTAGAACAATAATCGTCATTGCTCTATCTTCTGTTGTACTCTTGTTGGTTTTGGTTGGAGCATTTTACATCATTTTGAAATGGAGGAAAATTAGGAGACCATCAAGTGCTGTTGGCCCTGCATTCACATCATGTCTAAACAAGAGATCTGGCATGGAATTTATGTTGTCAAGAAGAATTATGAGCTCAAGATCTATGTCTCTTGCGTCCGCTCTCGCTCATTCTATTCTCTCGGTTAAAACATTTTCCTTTTCTGAGCTTGAGAAAGCAACAACTAAGTTCAGTTCTCAGAGAGTATTAGGAGAAGGAGGATTTGGACGTGTTTATTGTGGGACATTGGATGATGGAAATGAAGTTGCAGTTAAGCTGCTAACAAGGGATGGTCAGAATGGAGACCGTGAATTTGTTGCAGAAGTTGAGATGCTAAGCCGCTTGCATCATCGTAATCTTGTGAAACTCATTGGTATATGCATAGAAGGGCCAAGGCGTTGCTTGGTTTATGAGCTTTTTCGCAATGGTAGTGTTGAGTCTCATTTGCATGGTGATGACAAGAAAAGGAGCCCTCTAAATTGGGAAGCACGGACAAAAATTGCCCTTGGATCTGCAAGAGGATTGGCTTATCTACACGAAGATTCTACTCCTCCTGTAATTCACCGAGATTTTAAAGCTAGCAATGTGTTGTTAGAAGATGACTTTACCCCCAAGGTTTCTGATTTTGGATTAGCAAGAGAAGCGACCGAAGGAAATAGTCATATTTCTACAAGGGTCATGGGTACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTCGTTAAAAGTGATGTTTATAGTTTTGGTGTTGTGCTGCTTGAGCTTCTGACAGGCAGAAAACCAGTGGACATGTCTCAACCTCAGGGGCAGGAGAATCTTGTAACGTGGGCTCGCCCACTATTGAGAAGTAGAGAAGGTTTAGAACAGCTGGTGGATCCATCTTTGGCTGGAAGCTATGACTTTGATGACATGGCAAAGATGGCTGGTATTGCTTTCATGTGCGTACACCCGGAGGTCAATCAGAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTTAAGTTGATCCACAACGACACCAATGAGAGTAACAAGGAGTCTTCTGCTTGGGCCTCGGATTTTGGAGGTGAACTTGTCTTTTCTGATAGCAGTTGGTTGGATGCTGAAGAGTTAGCCCCAAGATTAGCTTATGGACAAGCATCAACCTTAATCACAATGGATTTCAATTCTGATCATCTTGAAATGATGGAAAACAGACCGTTTTCAGCTTCAAGCTTGAATGGAGATGAGATTTCTTTGCCGATCAGGCACCGGGTTAGATCAGGCCCCTTGAGAATAGCCAAGAGTAAGCTACCATTTACTAAGCTTACTCGAAGTCAGAGTGAACGTGTGGTACATCCTTCCAAGCGTGTTTGGAATGATGATGGTTACTGGGTTTAA 2262 0.4302 MLFLPLRTLAMSMSTSRIFLLALLFSFSVNSVSTNVPFASAERAKMWLVKPSSGPSFAPVQSPSYQVPIATPRPQLPHYHHRHHCGKPYAAAPSLSKDQACSQICTDPLTATPFGSPCGCVFPMKVRLVLDAAPLAVFPVIDELEIELSSGTYLKQSQVRIMGVTADSQNQGKTTIDIYLVPLGEKFDNTTAVLLSKRFWHNEVPLNRSLFGDYAILCITYPGIPSPRPPETLTGRGHMPRESINVLPITADMNSENEKINLRTIIVIALSSVVLLLVLVGAFYIILKWRKIRRPSSAVGPAFTSCLNKRSGMEFMLSRRIMSSRSMSLASALAHSILSVKTFSFSELEKATTKFSSQRVLGEGGFGRVYCGTLDDGNEVAVKLLTRDGQNGDREFVAEVEMLSRLHHRNLVKLIGICIEGPRRCLVYELFRNGSVESHLHGDDKKRSPLNWEARTKIALGSARGLAYLHEDSTPPVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGNSHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSFGVVLLELLTGRKPVDMSQPQGQENLVTWARPLLRSREGLEQLVDPSLAGSYDFDDMAKMAGIAFMCVHPEVNQRPFMGEVVQALKLIHNDTNESNKESSAWASDFGGELVFSDSSWLDAEELAPRLAYGQASTLITMDFNSDHLEMMENRPFSASSLNGDEISLPIRHRVRSGPLRIAKSKLPFTKLTRSQSERVVHPSKRVWNDDGYWV* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0356 753 CDD STKc_IRAK 361 630 - -
Gso10g0356 753 Pfam Protein tyrosine and serine/threonine kinase 357 624 IPR001245 GO:0004672|GO:0006468
Gso10g0356 753 Gene3D Transferase(Phosphotransferase) domain 1 431 649 - -
Gso10g0356 753 PANTHER OS01G0750732 PROTEIN 16 749 - -
Gso10g0356 753 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Gso10g0356 753 SUPERFAMILY Protein kinase-like (PK-like) 337 630 IPR011009 -
Gso10g0356 753 ProSiteProfiles Protein kinase domain profile. 355 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0356 753 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 16 749 - -
Gso10g0356 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Gso10g0356 753 Gene3D Phosphorylase Kinase; domain 1 327 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0356 Gso-Chr10 3730773 3737921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0356 102 648 Receptor kinase-like Gene Family AT5G56890 56.415 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gso10g0356 PK_Tyr_Ser-Thr 6.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0356 - - gmx:100790546 1444.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1418 19 43038462 43044912 Gso10g0356 10 3730773 3737921 PCT
Gso3g1423 3 40197440 40203862 Gso10g0356 10 3730773 3737921 PCT
Gso10g0356 10 3730773 3737921 Gso19g1418 19 43038462 43044912 PCT
Gso10g0356 10 3730773 3737921 Gso3g1423 3 40197440 40203862 PCT