Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0347 ATGCAGATGAAAACTCAGTTTTTCTTCTACTTCTGTTGCATTTGCTGTTTCTCTTATGGCTATGCAGCTGCAGCAAATGATGAAGTAGCTGCTTTACTTTCTATAAAAGAAGGACTCACTGATCCACTGAATAGCCTGCATGATTGGAAATTGGTGGACAAAGCAGAAGGGAAGAATGCAGCTCATTGTAACTGGACTGGTGTCCGGTGCAACTCCATTGGAGCCGTGGAGAAGCTCGATCTCTCCCGCATGAATCTGAGTGGCATTGTGTCCAATGAGATACAAAGGCTAAAGAGTCTCACTTCTCTAAACTTGTGTTGCAATGAATTTGCCTCATCATTGTCATCCATAGCCAATCTCACCACACTGAAGAGTCTTGATGTGAGCCAGAATTTCTTCACTGGTGACTTTCCATTAGGTCTTGGAAAGGCATCAGGACTAATAACTTTAAATGCATCCAGCAACAATTTCTCTGGCTTTCTTCCTGAGGATTTTGGAAATGTCTCTTCTTTGGAGACTTTGGATCTCAGAGGCAGCTTCTTTGAAGGGTCAATTCCAAAATCCTTCAGTAACTTGCACAAATTGAAGTTCCTTGGTTTATCTGGGAATAATCTCACCGGGGAAATCCCGGGAGGGCTGGGACAGCTTTCATCACTGGAATGCATGATCATTGGATACAATGAATTTGAAGGAGGGATTCCACCCGAGTTTGGAAATCTCACCAAGCTGAAGTATCTTGATTTAGCAGAAGGTAATCTTGGTGGTGAAATTCCAGCTGAGTTGGGAAGGCTCAAATTGTTGAATACAGTTTTCTTGTATAAAAACAAATTTGAAGGCAAGATTCCACCAGCAATTGGCAACATGACTTCATTGGTGCAGCTGGATCTCTCAGACAACATGTTATCAGGAAATATTCCAGGTGAAATAAGTAAGCTGAAGAATTTGCAGCTTCTGAACTTCATGCGGAACTGGCTATCGGGTCCTGTGCCTTCTGGCCTTGGTGATTTACCTCAACTTGAGGTGCTTGAGCTATGGAACAATTCCTTGTCAGGGACATTGCCTAGAAACCTTGGCAAGAATTCACCATTGCAGTGGTTGGATGTATCATCCAATTCACTCTCTGGTGAGATTCCAGAAACTCTTTGCACCAAGGGCTATCTCACCAAGCTCATACTTTTCAATAATGCCTTCTTGGGTCCAATTCCCGCAAGCCTATCAACATGTCCTTCACTTGTTCGTGTTCGAATTCAGAACAATTTTCTTAATGGGACAATTCCTGTGGGTCTGGGTAAGCTTGGGAAGCTTCAGAGGTTAGAATGGGCTAACAATAGTCTCACTGGTGGAATTCCTGATGACATTGGTTCTTCTACATCCCTTTCTTTCATTGATTTTTCCAGAAACAACCTCCACTCTTCTCTTCCTTCGACCATTATTTCCATTCCAAATCTGCAAACTTTAATTGTCTCCAACAACAACTTGGGAGGTGAAATCCCTGACCAATTCCAGGATTGTCCCTCACTTGGTGTCCTTGATCTCTCATCAAATCGATTCTCTGGAAGCATTCCATCTAGCATTGCATCATGTCAGAAATTGGTAAACTTGAACCTACAGAATAACCAATTGACTGGTGGAATCCCAAAATCATTAGCAAGCATGCCTACATTGGCCATTCTTGATCTTGCCAACAACACTCTGAGTGGTCATATACCTGAAAGCTTTGGTATGTCTCCAGCTCTAGAAACATTCAATGTCTCACACAACAAGCTAGAAGGTCCTGTCCCAGAAAATGGCGTGCTAAGAACAATAAACCCGAATGATCTTGTGGGAAATGCTGGCTTATGTGGTGGCGTTCTCCCTCCATGTGGCCAAACCTCAGCATATCCATTAAGTCATGGGAGCTCACGTGCAAAGCACATTCTTGTAGGATGGATCATTGGAGTATCATCAATACTAGCAATAGGGGTTGCAACTTTGGTAGCAAGATCTTTATACATGAAGTGGTACACAGATGGATTGTGCTTTCGAGAAAGATTTTATAAGGGTAGGAAGGGGTGGCCTTGGAGATTGATGGCCTTTCAGAGGCTAGATTTTACGAGTAGCGACATTTTATCTTGCATTAAGGATACAAATATGATTGGGATGGGAGCAACTGGGGTTGTTTACAAGGCTGAGATACCACAATCAAGTACAATTGTGGCAGTAAAAAAGTTGTGGAGATCAGGATCTGATATTGAAGTAGGAAGCAGCGATGACCTTGTTGGAGAGGTGAATCTTTTAGGGAGGCTAAGGCATAGGAACATTGTTAGACTACTAGGATTTCTTTACAATGACGCCGATGTTATGATAGTTTATGAATTTATGCACAATGGAAACCTTGGAGAGGCCCTGCATGGTAAACAAGCAGGGAGATTGCTTGTAGACTGGGTTTCCCGATATAACATAGCTCTAGGAATAGCACAAGGACTTGCTTATCTTCACCATGACTGTCATCCACCTGTTATCCATAGAGACATCAAGTCTAATAATATACTCCTAGATGCAAATCTCGAGGCAAGGATAGCGGATTTCGGATTGGCCAAGATGATGTTCCAAAAGAATGAAACAGTTTCCATGATTGCTGGATCCTATGGATACATTGCCCCTGAATATGGATACTCCTTGAAAGTGGATGAAAAGATTGACATTTACAGTTATGGAGTGGTTTTGTTGGAGCTTCTCACTGGAAAGCGGCCTTTAAATTCGGAGTTTGGAGAATCTATAGACCTAGTAGGGTGGATTAGAAGGAAGATAGACAACAAATCTCCAGAAGAAGCATTAGACCCCAGTGTAGGAAACTGCAAGCATGTTCAAGAAGAGATGCTATTAGTTCTCAGAATTGCACTTCTTTGCACTGCCAAGTTCCCCAAGGATAGACCCTCCATGAGGGATGTTATGATGATGCTCGGAGAGGCAAAGCCTCGGAGAAAGAGTGGTAGGAGCAGTGAGACATTTTCAGCAAACAAGGAGATGCCAGCTATTAGCTCATCACCAGTTAATGGCCTTCTGTAG 3048 0.4275 MQMKTQFFFYFCCICCFSYGYAAAANDEVAALLSIKEGLTDPLNSLHDWKLVDKAEGKNAAHCNWTGVRCNSIGAVEKLDLSRMNLSGIVSNEIQRLKSLTSLNLCCNEFASSLSSIANLTTLKSLDVSQNFFTGDFPLGLGKASGLITLNASSNNFSGFLPEDFGNVSSLETLDLRGSFFEGSIPKSFSNLHKLKFLGLSGNNLTGEIPGGLGQLSSLECMIIGYNEFEGGIPPEFGNLTKLKYLDLAEGNLGGEIPAELGRLKLLNTVFLYKNKFEGKIPPAIGNMTSLVQLDLSDNMLSGNIPGEISKLKNLQLLNFMRNWLSGPVPSGLGDLPQLEVLELWNNSLSGTLPRNLGKNSPLQWLDVSSNSLSGEIPETLCTKGYLTKLILFNNAFLGPIPASLSTCPSLVRVRIQNNFLNGTIPVGLGKLGKLQRLEWANNSLTGGIPDDIGSSTSLSFIDFSRNNLHSSLPSTIISIPNLQTLIVSNNNLGGEIPDQFQDCPSLGVLDLSSNRFSGSIPSSIASCQKLVNLNLQNNQLTGGIPKSLASMPTLAILDLANNTLSGHIPESFGMSPALETFNVSHNKLEGPVPENGVLRTINPNDLVGNAGLCGGVLPPCGQTSAYPLSHGSSRAKHILVGWIIGVSSILAIGVATLVARSLYMKWYTDGLCFRERFYKGRKGWPWRLMAFQRLDFTSSDILSCIKDTNMIGMGATGVVYKAEIPQSSTIVAVKKLWRSGSDIEVGSSDDLVGEVNLLGRLRHRNIVRLLGFLYNDADVMIVYEFMHNGNLGEALHGKQAGRLLVDWVSRYNIALGIAQGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMFQKNETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSYGVVLLELLTGKRPLNSEFGESIDLVGWIRRKIDNKSPEEALDPSVGNCKHVQEEMLLVLRIALLCTAKFPKDRPSMRDVMMMLGEAKPRRKSGRSSETFSANKEMPAISSSPVNGLL* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0347 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Gso10g0347 1015 PANTHER UNNAMED PRODUCT 3 997 - -
Gso10g0347 1015 MobiDBLite consensus disorder prediction 982 1015 - -
Gso10g0347 1015 SUPERFAMILY Protein kinase-like (PK-like) 701 981 IPR011009 -
Gso10g0347 1015 MobiDBLite consensus disorder prediction 996 1015 - -
Gso10g0347 1015 SMART LRR_typ_2 480 503 IPR003591 -
Gso10g0347 1015 SMART LRR_typ_2 192 216 IPR003591 -
Gso10g0347 1015 SMART LRR_typ_2 240 264 IPR003591 -
Gso10g0347 1015 SMART LRR_typ_2 336 360 IPR003591 -
Gso10g0347 1015 SMART LRR_typ_2 97 120 IPR003591 -
Gso10g0347 1015 SMART LRR_typ_2 288 312 IPR003591 -
Gso10g0347 1015 ProSitePatterns Protein kinases ATP-binding region signature. 712 736 IPR017441 GO:0005524
Gso10g0347 1015 Pfam Protein kinase domain 708 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0347 1015 ProSiteProfiles Protein kinase domain profile. 706 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0347 1015 Gene3D Phosphorylase Kinase; domain 1 706 790 - -
Gso10g0347 1015 Pfam Leucine rich repeat 147 205 IPR001611 GO:0005515
Gso10g0347 1015 Pfam Leucine rich repeat 481 541 IPR001611 GO:0005515
Gso10g0347 1015 Gene3D Transferase(Phosphotransferase) domain 1 791 1004 - -
Gso10g0347 1015 SUPERFAMILY L domain-like 76 181 - -
Gso10g0347 1015 Gene3D Ribonuclease Inhibitor 179 283 IPR032675 -
Gso10g0347 1015 Pfam Leucine rich repeat N-terminal domain 25 71 IPR013210 -
Gso10g0347 1015 SMART serkin_6 706 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0347 1015 Gene3D Ribonuclease Inhibitor 284 363 IPR032675 -
Gso10g0347 1015 SUPERFAMILY RNI-like 150 580 - -
Gso10g0347 1015 Gene3D Ribonuclease Inhibitor 364 625 IPR032675 -
Gso10g0347 1015 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 997 - -
Gso10g0347 1015 SUPERFAMILY L domain-like 351 449 - -
Gso10g0347 1015 Gene3D Ribonuclease Inhibitor 24 178 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0347 Gso-Chr10 3670117 3674069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0347 7 1015 Receptor kinase-like Gene Family AT1G08590 59.922 0.0 1157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso10g0347 Pkinase 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0347 - - gmx:100788430 2004.56