Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0317 ATGGCCGAATTTTTCGTGTTCGACATTGCTGAATCCCTGCTAGGGAAGCTGGCTTCTTATGTTCATGAAGAAGTTTCTGGAGCATATGATGTGTATGAGGATCTTCAAGGGATCAAAGACACCTTGTCAATTGTGAAAGGTGTGCTGTTGGATGCTGAGGAGAAGAAGGAGCAGAAGCACGGGTTGCGGGAATGGCTGAGGCAGATTCAAAACATGTGCTTAGATGCTGAAGACGTGTTGGATGGATTTGAGTGCCAAATTTTGCGAAATCAAGTTGTCAAAGCTTCAGGCAGCACCAGGGTGAAGGTAGGCCACTTTTTTTCTTGGTCTAATTCTCTTGTTTTCCGTCTTAGGATGGCTCGTCAAATCAAACATGTTAGGCATAGATTGAACAAGATAGCAGCTGATGGGAACAAGTTTGGTCTTGAGAGGATTGATGTTGATCACAGACTTGTGCAGAGGAGAGAAATGACTTATTCACATGTTGATGCTTCTGGGGTGATAGGAAGGGAGAATGATGTGGAAGAAATTATCAATCTTTTAACGCAACCTCATTCTGGTGGTGATGGAGATAATAAAAGTGTGTGTGTTATTCCCATAGTGGGTATTGGAGGTTTGGGGAAGACCACACTTGCAAAGTTGGTGTTCAATGATAAGAGGATGGATAAACTTTTCCAATTGAAGATGTGGGTGTGTGTCTCTGAAGATGACTTTGACATTAGGCGGATAATTGTTAAAATCATCAATTCTGCTTCAGCTCCAACTAGTGCTCTTGTTCACCAAGAAAACATTAATAACTTAGATATTGAGCAGTTACAAAGTCGTCTTAGACAAGTGCTTTCTGATCAGAAGTATTTACTAGTGTTGGATGATATATGGAATGATGACCGCCCAAAATGGATAGAGTTGAAAGATTTAATAAAAGTTGGTGGAATGGGAAGCAAAATCTTGGCAACAACTCGAAGTAACTCAATTGCTTCAATGATGGGCACTGTTCCCTCGTATGTTTTAGAAGGCCTTTCTATGGAGAATTGTTTATCACTCTTTGTCAAATGGGCATTTAAGGAAGGTGAGGAAAGAAAGTATCCAAATCTAGTGGAGATGGGAAAAGAAATTGTGAAAAAATGCCGAGGCGTTCCATTAGCTGTGCGGACTTTAGGAAGTTCTCTGTTTTTAAATTTTGATTTAGAAGGGTGGGAATTCGTAAGAGACCATGAGATATGGAACTTAAAACAAAAAAATTATGACATTTTACCTGCTCTTAAGTTGAGCTATGATCAAATGCCATCCCATTTGAAGCACTGTTTTGCTTACTTTTCCCTTTTCCCTAAAGATTTTGGCTTTGCTGGTAATCAAATTTCAAATCTTTGGGTGGCACTTGGATTACTTCGATCACCAGTTGGAAGTCGACATGTAGAGAATGTTGCAAAACAATATATTGATGAGTTACGCTCAAGATCATTTCTAGAGGATTTTGAGGACTTCGGCCACTTTTACTATTTCAAACTACATGATTTGGTGCATGATCTTGCGCTGTATATTTCAAAAGAGGATCTTCTAGTGGTAAACTCACGTACTCGCAATATACCTGAGCAAGTAAGGCATTTATCAGTTGTTGAAAATGATTCACTTCGCCATGCTTTGTTCCCCAGGTCCAGAAGTGTGAGAACTATACTATTTCCCATTCATGGAATCGGTGTTGGCAATGAAGCTCTCTTGGATGCATGGATAACAAGATACAAATATTTACGGCTTCTAGATTTAAGTGATTCCTCTTTTGAGACTCTACCTAATTCAATTGCTAAGTTGGAACTTTTGCGCGCTCTCAAGCTTGAAAATAATTGCAGAATAAAAAGACTTCCTCATTCTCTATGCAAACTCCAAAATTTGCTATTTTTGTCACTTAGAGGATGCGTGCAGCTTGAAACATTGACTAAAGGATTAGGGATGTTAATCAGCCTTCAACACTTGCATATAACCACAAAACAATCTATTCTGTCAGAGGAAGATTTTGCAGGCTTAAGCAATGTTCACACTTTGAGTTTTGAGTATTGTGACAATTTGAAGTTTTTGTTCAGACGTGCACAACTCCCTTCCCTTGAGGTTTTGCATGTTCAATCATGTGGGAGCCTAGAGTCGTTGCCTCTTCATATTCTTCCTAAACTTGAGGCTCTGTTGGTAAGACAGTGCGGGATGCTAAATCTGTCGTTGAACTATGAAAGCGCAATCCAAAGATTGAGGATGAAATTCCTGCATCTTGAGCATTGTCCAAGGCAACAGACATTGCCTCAATGGATTCTAGGAGCCGCTGACACTTTGCAGACATTGTTAATTATAAATTTTCATAGTCTTAAGATGCTTCCCGAGTGGCTGACAACAATGACTCATCTTAAGATGCTTCATATTGTTAACTGTCCTCTGCTGTTGTGTCTCCCAAGTGACATGCATTGCCTCACTGCCCTTGAAGATTTGAGCATAGATGGTTGTCCTGAATTGTGTAAAAAATGTGAGCCACAATCTGGTGAATTCTGGTCCTTCATTGCTCACATCAAACACCTTTCCATTGGAGAAACAAGAGAAGGGCACCTCCTTTTTCGAATGCTGTCAAGGCTGCGGTTGGATTTGCGTGGTTAG 2634 0.4013 MAEFFVFDIAESLLGKLASYVHEEVSGAYDVYEDLQGIKDTLSIVKGVLLDAEEKKEQKHGLREWLRQIQNMCLDAEDVLDGFECQILRNQVVKASGSTRVKVGHFFSWSNSLVFRLRMARQIKHVRHRLNKIAADGNKFGLERIDVDHRLVQRREMTYSHVDASGVIGRENDVEEIINLLTQPHSGGDGDNKSVCVIPIVGIGGLGKTTLAKLVFNDKRMDKLFQLKMWVCVSEDDFDIRRIIVKIINSASAPTSALVHQENINNLDIEQLQSRLRQVLSDQKYLLVLDDIWNDDRPKWIELKDLIKVGGMGSKILATTRSNSIASMMGTVPSYVLEGLSMENCLSLFVKWAFKEGEERKYPNLVEMGKEIVKKCRGVPLAVRTLGSSLFLNFDLEGWEFVRDHEIWNLKQKNYDILPALKLSYDQMPSHLKHCFAYFSLFPKDFGFAGNQISNLWVALGLLRSPVGSRHVENVAKQYIDELRSRSFLEDFEDFGHFYYFKLHDLVHDLALYISKEDLLVVNSRTRNIPEQVRHLSVVENDSLRHALFPRSRSVRTILFPIHGIGVGNEALLDAWITRYKYLRLLDLSDSSFETLPNSIAKLELLRALKLENNCRIKRLPHSLCKLQNLLFLSLRGCVQLETLTKGLGMLISLQHLHITTKQSILSEEDFAGLSNVHTLSFEYCDNLKFLFRRAQLPSLEVLHVQSCGSLESLPLHILPKLEALLVRQCGMLNLSLNYESAIQRLRMKFLHLEHCPRQQTLPQWILGAADTLQTLLIINFHSLKMLPEWLTTMTHLKMLHIVNCPLLLCLPSDMHCLTALEDLSIDGCPELCKKCEPQSGEFWSFIAHIKHLSIGETREGHLLFRMLSRLRLDLRG* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0317 877 Gene3D - 424 513 IPR036388 -
Gso10g0317 877 CDD RX-CC_like 2 134 IPR038005 -
Gso10g0317 877 Pfam Rx N-terminal domain 11 98 IPR041118 -
Gso10g0317 877 PANTHER DISEASE RESISTANCE PROTEIN RP 6 783 IPR044974 GO:0006952
Gso10g0317 877 Gene3D - 150 334 IPR027417 -
Gso10g0317 877 PRINTS Disease resistance protein signature 197 212 - -
Gso10g0317 877 PRINTS Disease resistance protein signature 279 293 - -
Gso10g0317 877 PRINTS Disease resistance protein signature 376 390 - -
Gso10g0317 877 PRINTS Disease resistance protein signature 695 711 - -
Gso10g0317 877 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 783 - -
Gso10g0317 877 Gene3D - 339 423 IPR042197 -
Gso10g0317 877 Gene3D - 10 124 - -
Gso10g0317 877 Gene3D Ribonuclease Inhibitor 516 874 IPR032675 -
Gso10g0317 877 Pfam NB-ARC domain 171 426 IPR002182 GO:0043531
Gso10g0317 877 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 438 IPR027417 -
Gso10g0317 877 SUPERFAMILY L domain-like 502 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0317 Gso-Chr10 3375869 3379612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0317 198 832 WRKY Transcription Factor Family AT5G45050 23.328 1.89e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0317 - - gmx:100794422 1386.32