Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0299 ATGTCTAACAATGAAGGTGCATTTGGGGTGATGTATGTGAAATTGAAGCCTCACCTTCTCATGGTTCTAGTTCAGCTGGTTCTTTCGTTTCTCTATTTCCTAGTAGAGGCTTCATTAAACAAAGCTATGAACCCTCATGTCTTTGTTACCTATCGGCATGCTGTTGGGGGCATAGTTGTGCTTCCTTTTGCTTATATTCGTGAAAGAAAAACATGGCCAAAGTTGACTTTGACGATGTTTGTGGAGCTATTTTTTCTTTCCCTCTTCGGGATCCGTCTTACCCTGAACATGTTTTTCGCAAGCTTGAAATATACCTCTCCTTCCTTTGTTGCATGTATGATTAACACAACCTCATCCCTTACTTTTATAATTGCAGTTGGACTCAGGCTAGAGGTTGTTGATGTTAAGAACACTCGTGGGCTTGCTAAAGTTTTTGGAACTGTATTATCTTTGATTGGTGCATTGATAATGACTTTGTACGAAGGGCATACGATACATAGCTTACAGGGTGCCCCGCTCCATGTCAGAGGCAATTTGGTTCATAAAAATTGGATCAAAGGATCAATTTTGTCAGTTGCAAGTTGCATATCATGGTCTTTATGGTACATACTACAGGGAGTTATATGTGGTGGTTTTGTTATATTCAGTCAATTCTGGACCGCGGAACAAAAAGGGCCAGTCTTTGTGAGCATGTTTAATCCCCTTGGAGCAATTTTGGTGGCAATCCTAGCATATTTTGTTTTTGGGGAACAACTTTACACTGACAGTTTATTGGCCTATACTTGCTAG 789 0.403 MSNNEGAFGVMYVKLKPHLLMVLVQLVLSFLYFLVEASLNKAMNPHVFVTYRHAVGGIVVLPFAYIRERKTWPKLTLTMFVELFFLSLFGIRLTLNMFFASLKYTSPSFVACMINTTSSLTFIIAVGLRLEVVDVKNTRGLAKVFGTVLSLIGALIMTLYEGHTIHSLQGAPLHVRGNLVHKNWIKGSILSVASCISWSLWYILQGVICGGFVIFSQFWTAEQKGPVFVSMFNPLGAILVAILAYFVFGEQLYTDSLLAYTC* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0299 262 Pfam EamA-like transporter family 19 158 IPR000620 GO:0016020|GO:0016021
Gso10g0299 262 PANTHER WAT1-RELATED PROTEIN 11 205 IPR030184 GO:0016021|GO:0022857
Gso10g0299 262 PANTHER WAT1-RELATED PROTEIN 206 259 IPR030184 GO:0016021|GO:0022857
Gso10g0299 262 PANTHER WAT1-RELATED PROTEIN 11 205 - -
Gso10g0299 262 PANTHER WAT1-RELATED PROTEIN 206 259 - -
Gso10g0299 262 SUPERFAMILY Multidrug resistance efflux transporter EmrE 196 258 - -
Gso10g0299 262 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0299 Gso-Chr10 3215221 3218323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0299 12 258 Nodulin-like Gene Family AT5G13670 30.293 3.38e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0299 - - gmx:100808275 435.647