Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0298 ATGGGTAGCAACCTGCACCGACTGCTCAGAAGCTTCTGTTTGGGCACTGATTGGAAGTATGCCATCTTTTGGAAGCTCAAACAACGGGCTCGGATGATCTTGACATGGGAGGATGCTTACTATGACAATCCAAGTATTTGTGAGTCTTCCGAAAACAAGAGCTGCCATAATTCATTGGAGCAGATTGGCAGTGCGGATTTTTCGCATGATCCTCTAGGGTTAGCTGTGGCAAAGATGTCATATCATGTATATTCATTAGGGGAAGGAATTATTGGACAGGTAGCTGTTACTGGAAAGCATCGGTGGATCTGTGTAGATAATCATGTTACAAGTTCTGGCCCATCTTTTGAGTTTGCTGATGGGTGGCAATCTCAGTTTTCTGCTGGAATTAGAACCATTGTTGTTGTAGCAGTAGTTGCTCTTGGAGTTGTTCAGCTTGGCTCTTTAAATAAAGTTACTGAAGATATGGGGGTCGTGTCCTGTATCCGAAGTCTCTTTTTGTCTACTCAAGATTACACAATAAGCCATGTTCATAATCAAGTACAAAATAGTGTGAAGAATTCCTCATCTGTGCTGGATACCAAAACTTCAAAAAGCATGCCTGCCTTACATGATACTGAGAAAACCATGAAGCATGAAGCACTGGATATTTTAATGCCCTTTCAATGTCCTCGGAAGAATTATTCACCTCACGCTGTTCATCAGAAGATGGTTGTTGATGTGGCCAAGCATGATTTGCCTGAATTAAACAGTGATAGAAGTTCCATTTTGCTTCAGTCAATGTCAAATATGATGAACGTGGAGCAACAGAAATTAGTAGGGATGAGACCTGTAAATGAGAGTAAGTTTGAAGGGAACAGTGGCTGTGAAGATAAAAGTTTGGAATCAGGAAAAAATGTTTCATCATTTTTACACCATTTAGTAATGGATAATAATAGTGTCAATGATTTAGCATGCCCGTCAGAAAATGTTGGAGTAGATCCAGTATCCTTCTCTTCAGGCTTTCTTGATGCAGCTGTTTGTGTGAGCGATAAGTTTCAGTATGTAGACATAAACGAAAAAGGAGTGTTGAATGTGCCCAGACCTTCAGATGCAAACTTCCAAATAAAAAGTGAGAAGTCAAAGTTTCAGACTGAACCTTGTTACAAGGATACCTCATACACAATGAAGTTTCCTGCTGGCTATGAGCTACATGAAGCACTTGGACCAAGTTTTCTGAAAGGGAGTAAGTGTTTTAATTGGGCAGCGGAAGCAAATCAAGATGTTAAAAATGCTGAGATGTCAGATGAGATTAGCTGTAGCCAATTGACTTCTGAATTTCGCCCAGAGCATCTCTTGGAAGCTATGGTGGCTAACATTAGCCATAGTAATAATAATGTTAATAGTGAGTTATCATTTTCGACATCAATGCAGGCTGCAATTGCCTCAGGAAGAAATCCTGAAGGTTCTGTTCACGCTGTGCACACTATTAATTCTGAAGGCTGTTCAATAGATCAGCTTCCTTTTGTTAAAGAGGACAAACATTATAGTTTGAGTTCATCTGGGATATGCGGTGTAATGTCCCCAAAGGGATTTTCTTCTACATGTCCTAGTTCATGTAGTGAACAGTTTGAGAGGTCTTCTGAACCAACTAAGAACAGCAAGAAGAGGGCTAGGCCTGGGGAAAGTTGTAGGCCTAGACCAAGGGACAGACAACTGATACAAGATCGTATTAAGGAGTTGAGGGAACTGGTGCCAAATGGTGCAAAGTGCAGTATTGATTCATTGCTGGAGTGCACCATAAAACACATGCTCTTTCTTCAGAACATAACTAAGCATGCTGACAAGCTAAATAAATTTGCGGATACAAAGACAAAGTTACATCACATGGAAAAAGACATTCCTGGTCAACAAGGTTCAAGTTGGGCAATGGAAGTAGGAGGCCATCTGAAAGTTAGTTCAATACTAGTGGAGAATCTTAACCAGAATGGCCAGATGTTTGTTGAGATGGTGTGTGAAGAGTGCAGCCATTTTCTTGAAATAGCAGACGCCATCAGAAGCTTAGGTATGACAATTTTGAATGGTGCAACAGAAGCTCACGGTGAGAAGACATTTGTATGTTTTGTGGTCGAGGCAGGATCAGAGGGCCAAAACAACAGAAATTTACACAGATTGGATATCTTGTGGTCACTTGTTCAATTACTTCAATCCAAGAGCACAATGTATTCATAA 2211 0.4062 MGSNLHRLLRSFCLGTDWKYAIFWKLKQRARMILTWEDAYYDNPSICESSENKSCHNSLEQIGSADFSHDPLGLAVAKMSYHVYSLGEGIIGQVAVTGKHRWICVDNHVTSSGPSFEFADGWQSQFSAGIRTIVVVAVVALGVVQLGSLNKVTEDMGVVSCIRSLFLSTQDYTISHVHNQVQNSVKNSSSVLDTKTSKSMPALHDTEKTMKHEALDILMPFQCPRKNYSPHAVHQKMVVDVAKHDLPELNSDRSSILLQSMSNMMNVEQQKLVGMRPVNESKFEGNSGCEDKSLESGKNVSSFLHHLVMDNNSVNDLACPSENVGVDPVSFSSGFLDAAVCVSDKFQYVDINEKGVLNVPRPSDANFQIKSEKSKFQTEPCYKDTSYTMKFPAGYELHEALGPSFLKGSKCFNWAAEANQDVKNAEMSDEISCSQLTSEFRPEHLLEAMVANISHSNNNVNSELSFSTSMQAAIASGRNPEGSVHAVHTINSEGCSIDQLPFVKEDKHYSLSSSGICGVMSPKGFSSTCPSSCSEQFERSSEPTKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLQNITKHADKLNKFADTKTKLHHMEKDIPGQQGSSWAMEVGGHLKVSSILVENLNQNGQMFVEMVCEECSHFLEIADAIRSLGMTILNGATEAHGEKTFVCFVVEAGSEGQNNRNLHRLDILWSLVQLLQSKSTMYS* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0298 736 MobiDBLite consensus disorder prediction 536 564 - -
Gso10g0298 736 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 736 - -
Gso10g0298 736 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 551 600 IPR011598 GO:0046983
Gso10g0298 736 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 736 IPR043561 GO:0003700|GO:0006355
Gso10g0298 736 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Gso10g0298 736 MobiDBLite consensus disorder prediction 541 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0298 Gso-Chr10 3190137 3197557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0298 1 732 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 41.677 7.74e-163 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0298 - - gmx:100777740 1446.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1357 19 42321615 42329658 Gso10g0298 10 3190137 3197557 PCT
Gso3g1361 3 39533952 39541795 Gso10g0298 10 3190137 3197557 PCT
Gso10g0298 10 3190137 3197557 Gso19g1357 19 42321615 42329658 PCT
Gso10g0298 10 3190137 3197557 Gso3g1361 3 39533952 39541795 PCT