Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0289 ATGGGGATTCCAGAAAATATTGTTGTTGGTTCTCATGTTTGGGTTGCAGATCCAGAACTAGTTTGGATTGATGGACTGGTACTGAATATTAATGGTGAAGAAGCAGAAATTCAAACTAGTAATGAGAATAAGGTTGTTTCCCGTTTGTCAAAATTATATCCCATGGATATGGAAGCGCCTACTGATGGGGTTGATGACATGACCAAGCTTGCTTATTTGCATGAGCCAGGAGTGCTGCATAATTTGGAAACCAGATACATGATGAATGAAATATATACTTATACCGGGAATATTCTCATTGCAATCAATCCCTTCCAAAATCTTTCACACCTGTATGATACTAATGTGATGCAAAGATACAAGGGAGCAACGATTGGAGGCTTGGGCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGGGCAATGATTAATGAGGAAAAAAGCAACTCAATTCTGGTTAGTGGTGAGAGTGGTGCTGGTAAGACAGAAACCACCAAAATGCTTATGCAGTACCTGGCATATTTGGGTGGTAACACTTCATCTGAAGGACGAACTGTTGAAAAACAAGTACTAGAATCAAATCCAGTTCTTGAAGCATTTGGTAATGCAAAAACTGTTAGAAATGACAATTCCAGCCGTTTTGGAAAATTTGTTGAGATTCAATTTAATAAGTATGGACGAATGTCTGGTGCAGCCATTAGAACTTATCTTCTTGAGAAATCTCGTGTTTGCCAAATCTCAGATCCTGAGCGTAACTATCATTGTTTCTACCTTCTCTGTGCTTCTCCTCCTGAGGAAAAGGAGAAATATAAGTTGGGAGATCCTAGATCATTTCACTACCTTAATCAATCCAATTGCTATGAATTAGTTGGTGTAAATGCTGCTCAAGAGTATCTGAGCACCAAGAGAGCCATGGATATTGTGGGAATCAGTCAGGAGGAGCAGGATGCTATTTTCAGAGTTGTAGCTGCTATTCTTCATCTTGGAAACATTAAGTTTGCAAAATCAGAAGAAACTGATTCATCAGTTCTAGAAGATGAAGCATCCAGGTTTCATCTCCAAACAACAGCAGAACTTCTCATGTGTGATCCTAATTGTTTGGAAGGTGCACTACGTGAGCGTGTGATGATTACTCCAGAAGAAATCATCAAAAGAAGTCTTGATCCTCTTGGTGCTACAGTTAGCAGGGATGGTTTAGCCAAAACACTATATTCTCGATTATTTGACTGGTTAGTCCAAAAAATTAATATCTCCATTGGGCAGGATCCTAGCTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAACTTTCAAACGAATAGTTTTGAGCAGTTTTGTATAAATTTCACAAATGAAAAGCTGCAACAACACTTCAACCAGCATGTGTTTAAGATGGAGCAAGAGGAATACACAAAAGAAGGGATTGACTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTACTGGATCTCATTGAAAAGAAACCAGGTGGAATCATTGCTCTGCTCGATGAAGCTTGTATGTTTCCGAAGTCAACTCATGAAACATTTTCACAGAAGCTTTATCAGACATTCAAAGATCACAAACGCTTCATCAAGCCAAAATTGGCACGCTCAGATTTCTCTGTTGTTCATTATGCAGGGGAGGTTCAGTATCAATCTGAGCAATTTTTAGACAAGAACAAAGACTATGTTGTTCCTGAACATCAAGACATGCTAAGTGCTTCAAAATGTTCATTTGTATCAGGCCTTTTTGCTCCACTTTCTGAGGAAACAGCCAAATCTGCTAAATTTTCTTCTATTGGTTCTCGTTTCAAGCTACAATTACAACAGTTGATGGATGCACTCAATCTGACAGAGCCACACTATATTAGATGTATAAAGCCAAATAGTCTATTAAAACCTTTCATATTTGAAAATATGAATGTTATCCAACAATTACGATCTGGTGGTGTTCTTGAAGCAGTAAGAATTAAATGTGCTGGATTCCCCACTCACTGGACCTTTCATGATTTCTTAACTCGATTAGGCATTCTTGCTCCGGAGGTTCTTCAAGGGAACTTCGAAGAAAAGGATTCATGTAAAAAGATTTTGGAGAAGATTGGGCTGACAGGTTATCAGATAGGTGAAACACAAATATTCCTAAGAGCTGGTCAGATGGCTGAATTGGATGCTCGGAGAGCATTCCTGCTCAGTAATTCTGCAATAGTTATCCAAAAGCATACTAAAACTCATTTTAGTCAGAAAAGATATATTGCATTGCAAAAGTCCTCTGTTTTTCTGCAATCCATTTGCAGAGGAGAACTGGCTCGAAGATCGTATTATCACATGAAGAGGGAAGCAGGTGCAGTCAGAATTCAAAAGTATATGCGTGGAACACTAGCCAGGAAATGGTACACCGAAATAAAGATATCTGCCATTGTCTTGCAGACAGGTTTTCGAGCAGTGGCTGCTTGTAATAAATTTAGATATAGAAAGCAAATTAGTGCATCGACTACTATTCAGTCCAATTGGCGCCGGCATAAAGCTCTCTCTGACTATCAGAACCTTAGGAAAGCATCAATCAGTTCACAAACCATCAATCACTCCAGTTATAAACATGAACAGAAGGTTTTTGAGACACCTGCGCAAAATGAAAGTCCTTCTATGGAAGAATGTTCAAATCCTGTCCAAGAAGAATCCTCAAGTCCTTTCCAAGATGATGAAAGCATTGAAGCTATCAGGGATTCCTCTATTCCTCTCAAAGACACTGAAAAGATTGAGGTTCTTACTATAGAAATAAAAAACTTGAAGGTCATGTTGCAGGAAGAAAAACAAAGAGGTGATGAATATGAAAGGAAATATGTAGAAGCTCAAGGATCTAGTGAAGAGTTACGCAAAAAGTTAGCAGAAACTGAAAAAAGAGTACATCAGCTTCAGGACTCGTTGAACAGGATGATATCTTCCATGTCAAGTCAAGTTGCCGAGCTGAAGGCGATCTTGAGTACTTCATCAAGATTGAGTTCAACTTTTCGACCTATTGCTAGGGTTGACATTGCTTCCAGTAACTCTGATACTTCATCTACAGACTCTGATTTCACATTTCCGGCTCCTGTTTCAAATACTGAACTTTTATCTTCCCCAGAGTCAAATTCTTTCCAACTAGTAGTTCAGGATGTCACTGCAGGGGATGGATCGGGATCTGAAAGTGGAAAGGAGGGTTCATTTGATGATTTCTTCTAG 3234 0.3884 MGIPENIVVGSHVWVADPELVWIDGLVLNINGEEAEIQTSNENKVVSRLSKLYPMDMEAPTDGVDDMTKLAYLHEPGVLHNLETRYMMNEIYTYTGNILIAINPFQNLSHLYDTNVMQRYKGATIGGLGPHVFAIAEAAYRAMINEEKSNSILVSGESGAGKTETTKMLMQYLAYLGGNTSSEGRTVEKQVLESNPVLEAFGNAKTVRNDNSSRFGKFVEIQFNKYGRMSGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPPEEKEKYKLGDPRSFHYLNQSNCYELVGVNAAQEYLSTKRAMDIVGISQEEQDAIFRVVAAILHLGNIKFAKSEETDSSVLEDEASRFHLQTTAELLMCDPNCLEGALRERVMITPEEIIKRSLDPLGATVSRDGLAKTLYSRLFDWLVQKINISIGQDPSSKCLIGVLDIYGFENFQTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEGIDWSYLEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLYQTFKDHKRFIKPKLARSDFSVVHYAGEVQYQSEQFLDKNKDYVVPEHQDMLSASKCSFVSGLFAPLSEETAKSAKFSSIGSRFKLQLQQLMDALNLTEPHYIRCIKPNSLLKPFIFENMNVIQQLRSGGVLEAVRIKCAGFPTHWTFHDFLTRLGILAPEVLQGNFEEKDSCKKILEKIGLTGYQIGETQIFLRAGQMAELDARRAFLLSNSAIVIQKHTKTHFSQKRYIALQKSSVFLQSICRGELARRSYYHMKREAGAVRIQKYMRGTLARKWYTEIKISAIVLQTGFRAVAACNKFRYRKQISASTTIQSNWRRHKALSDYQNLRKASISSQTINHSSYKHEQKVFETPAQNESPSMEECSNPVQEESSSPFQDDESIEAIRDSSIPLKDTEKIEVLTIEIKNLKVMLQEEKQRGDEYERKYVEAQGSSEELRKKLAETEKRVHQLQDSLNRMISSMSSQVAELKAILSTSSRLSSTFRPIARVDIASSNSDTSSTDSDFTFPAPVSNTELLSSPESNSFQLVVQDVTAGDGSGSESGKEGSFDDFF* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0289 1077 MobiDBLite consensus disorder prediction 862 906 - -
Gso10g0289 1077 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Gso10g0289 1077 CDD MYSc_Myo11 76 720 IPR036018 -
Gso10g0289 1077 Gene3D - 666 733 - -
Gso10g0289 1077 Pfam IQ calmodulin-binding motif 833 851 IPR000048 GO:0005515
Gso10g0289 1077 Pfam IQ calmodulin-binding motif 760 778 IPR000048 GO:0005515
Gso10g0289 1077 Pfam IQ calmodulin-binding motif 786 803 IPR000048 GO:0005515
Gso10g0289 1077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 787 859 IPR027417 -
Gso10g0289 1077 Coils Coil 924 986 - -
Gso10g0289 1077 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g0289 1077 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 6 1015 - -
Gso10g0289 1077 SUPERFAMILY Tropomyosin 918 994 - -
Gso10g0289 1077 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g0289 1077 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Gso10g0289 1077 SMART iq_5 805 827 IPR000048 GO:0005515
Gso10g0289 1077 SMART iq_5 734 756 IPR000048 GO:0005515
Gso10g0289 1077 SMART iq_5 782 804 IPR000048 GO:0005515
Gso10g0289 1077 SMART iq_5 757 779 IPR000048 GO:0005515
Gso10g0289 1077 SMART iq_5 830 852 IPR000048 GO:0005515
Gso10g0289 1077 MobiDBLite consensus disorder prediction 878 905 - -
Gso10g0289 1077 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g0289 1077 ProSiteProfiles IQ motif profile. 783 807 IPR000048 GO:0005515
Gso10g0289 1077 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gso10g0289 1077 Gene3D - 735 784 - -
Gso10g0289 1077 Gene3D - 785 835 - -
Gso10g0289 1077 Gene3D - 439 623 - -
Gso10g0289 1077 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g0289 1077 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g0289 1077 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g0289 1077 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g0289 1077 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g0289 1077 PANTHER MYOSIN 6 1015 - -
Gso10g0289 1077 Gene3D - 854 1012 - -
Gso10g0289 1077 Gene3D Kinesin motor domain 65 662 IPR036961 -
Gso10g0289 1077 Gene3D - 252 310 - -
Gso10g0289 1077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 785 IPR027417 -
Gso10g0289 1077 MobiDBLite consensus disorder prediction 1018 1077 - -
Gso10g0289 1077 MobiDBLite consensus disorder prediction 1018 1062 - -
Gso10g0289 1077 Pfam Myosin N-terminal SH3-like domain 10 45 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gso10g0289 1077 ProSiteProfiles IQ motif profile. 831 860 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0289 Gso-Chr10 3082049 3105168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0289 1 983 Myosins gene family AT1G54560 64.120 0.0 1399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0289 K10357 - gmx:100819436 2088.92