Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0283 ATGAAATTGCAACACATATTTGAGAAGCAACCATCTCCTGATTCTTTAAATGCATCAAGCACTGCAACATCAAAGCCTAGATATGTTTTGGCCAACAACTCAGATCTCAACTTCTTACCCATCAAAATTGACCTGAATTGTGCTCGCATGGTGACGGCAGAGTTGGTGGGTACTTTTATTTTGATGTTCTGTGTGTGTGGAATCACTGCAAGCACACGATTCCAAAATGGTGCAGTGGGCCTTCTGGAGTATGCAGCTATAGCAGGATTAACAATGGTGGTGATTATTTTCTCTATAGGGCCAATATCTTGTGCACACGTTAACCCAGCAGTCACAATAGCCTTTGCAACAATTGGTCAATTTCCATGGTTCAAGGTTCCAGTTTACATAATAGCACAGACAGTAGGTTCTATGTCGGCAACATACATAGGTAGCCTTGTATACGGCATAAAATCAGAGGCTATGATGACCATGCCACTCCAAGGGTGCAACTCTGCCTTCTGGGTGGAGGTTATTGCAACTTTCATCATCATGTTCCTCATTGCAGCTTTGACATCTGAATCTCAATCAGTGGGCCATTTATCTGGCTTTGTTGCTGGAATGGCAATTGGGCTTGCTGTACTAATCACAGGCCCAGTCTCAGGTGGATCAATGAATCCAGCAAGATCATTAGGTCCAGCAATTCTCTCATGGAAATTCAAGAACATATGGATATACATGGTAGCCCCTAGTGGTGGAGCTGTAGCAGGAGCTGCAATGTTTCGTTTCCTACGCCTTCGAGACCAAAATTCTAGTATTTTGTCCTCCCCAAACATCAGTGATGTTGGTCGTTCCATACCCTTTTGCTCAAGTTAG 855 0.4351 MKLQHIFEKQPSPDSLNASSTATSKPRYVLANNSDLNFLPIKIDLNCARMVTAELVGTFILMFCVCGITASTRFQNGAVGLLEYAAIAGLTMVVIIFSIGPISCAHVNPAVTIAFATIGQFPWFKVPVYIIAQTVGSMSATYIGSLVYGIKSEAMMTMPLQGCNSAFWVEVIATFIIMFLIAALTSESQSVGHLSGFVAGMAIGLAVLITGPVSGGSMNPARSLGPAILSWKFKNIWIYMVAPSGGAVAGAAMFRFLRLRDQNSSILSSPNISDVGRSIPFCSS* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0283 284 PANTHER AQUAPORIN NIP7-1-RELATED 16 281 - -
Gso10g0283 284 Pfam Major intrinsic protein 47 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso10g0283 284 ProSitePatterns MIP family signature. 106 114 IPR022357 -
Gso10g0283 284 MobiDBLite consensus disorder prediction 1 21 - -
Gso10g0283 284 PRINTS Major intrinsic protein family signature 49 68 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso10g0283 284 PRINTS Major intrinsic protein family signature 88 112 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso10g0283 284 PRINTS Major intrinsic protein family signature 125 144 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso10g0283 284 PRINTS Major intrinsic protein family signature 169 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso10g0283 284 PRINTS Major intrinsic protein family signature 200 222 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso10g0283 284 PRINTS Major intrinsic protein family signature 237 257 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso10g0283 284 PANTHER AQUAPORIN NIP2-1 16 281 IPR034294 -
Gso10g0283 284 SUPERFAMILY Aquaporin-like 46 263 IPR023271 -
Gso10g0283 284 Gene3D Glycerol uptake facilitator protein. 26 266 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0283 Gso-Chr10 3008421 3019710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0283 44 262 Major Intrinsic Protein MIP AT4G10380 41.096 1.17e-53 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0283 K09874 - gmx:100817830 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1163 2 14557453 14559785 Gso10g0283 10 3008421 3019710 GST