Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0282 ATGGCCACAGAAGAGCCCACTGTCGCGGTGGAACCCGCTCCCGAACCTGCCTCCGCCGATCCTCCCCCGGAGGAGAAGGAGGAGACCAAACCTGAAGCCAAGGCTAAGAAAACCAAGGAGCCCAAACCTAAAAAGGTTTCCAGACCTCGCAACCCTCCCACTCATCCTTCATACGAAGAGATGGTTAAAGATGCAATTACCTCGCTGAAGGAGAAAACCGGTTCGAGCCAATACGCGATTGCGAAGTTCATCGAGGAGAAGCACAAGCAGCTTCCACCGAACTTCAAGAAGCTTCTTCTCTACCATTTGAAGAAGCTCGTCGCCGCCGGAAAACTCGTCAAAGTCAAAGGCTCGTTCAAGCTCCCACCTACCAGACCTGCTGCATCTTCTTCTTCTTCTTCTTCGCCGGCAAAGAAGAAAAAGCCCGCAGCTGCCAAGTCCAAGCCTAAGCCTAAGCCCAAGCCCGCTGCGAAAGCCAAGGATACTAAGGCAACTAAATCGAAGGCACCAGCTAAGCCCAAGCCAGCTACTAAGCCTAAAGCCAAAGCTCCAGCCAAGGCCAAACCCGCTGCTAAACCAAAGGCTTCTGCTGCTGCCAAGCCCAAGCCTGCTGCCGCCAAGCCCAAAGCCGCTAAACCAGCTGCCAAGTCCAAGCCTGCTGCTAAAACAAAGGCTGTTCCTGCCAAGCCCGCGGCAAAGCCCAAAGCCAAGCCCGTCAAGGCTTCAAGGACGTCGACGAGGACTTCACCAGGGAAGAAAGCAGCTCCTGCTGCTAAGCCCGCGGCGAAGAAAGTTGCGGTGGCAGCGAAGAAAACGCCAGTGAAGAGTGTGAAACCGAAGAGTGTAAAGTCTCCGGCCAAAAAGGCTACGGCCAAGAGAGGGGGTAGGAAGTGA 894 0.5492 MATEEPTVAVEPAPEPASADPPPEEKEETKPEAKAKKTKEPKPKKVSRPRNPPTHPSYEEMVKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLYHLKKLVAAGKLVKVKGSFKLPPTRPAASSSSSSSPAKKKKPAAAKSKPKPKPKPAAKAKDTKATKSKAPAKPKPATKPKAKAPAKAKPAAKPKASAAAKPKPAAAKPKAAKPAAKSKPAAKTKAVPAKPAAKPKAKPVKASRTSTRTSPGKKAAPAAKPAAKKVAVAAKKTPVKSVKPKSVKSPAKKATAKRGGRK* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0282 297 PANTHER HISTONE H1 2 194 - -
Gso10g0282 297 PANTHER HISTONE H1 171 294 - -
Gso10g0282 297 MobiDBLite consensus disorder prediction 173 187 - -
Gso10g0282 297 MobiDBLite consensus disorder prediction 281 297 - -
Gso10g0282 297 MobiDBLite consensus disorder prediction 124 138 - -
Gso10g0282 297 SUPERFAMILY "Winged helix" DNA-binding domain 51 128 IPR036390 -
Gso10g0282 297 PANTHER HISTONE H1.1 2 194 - -
Gso10g0282 297 PANTHER HISTONE H1.1 171 294 - -
Gso10g0282 297 MobiDBLite consensus disorder prediction 1 60 - -
Gso10g0282 297 MobiDBLite consensus disorder prediction 20 39 - -
Gso10g0282 297 MobiDBLite consensus disorder prediction 114 297 - -
Gso10g0282 297 PRINTS Histone H5 signature 41 62 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Gso10g0282 297 PRINTS Histone H5 signature 68 85 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Gso10g0282 297 PRINTS Histone H5 signature 148 162 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Gso10g0282 297 PRINTS Histone H5 signature 179 196 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Gso10g0282 297 PRINTS Histone H5 signature 201 220 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Gso10g0282 297 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 54 123 IPR005818 GO:0000786|GO:0003677|GO:0006334
Gso10g0282 297 SMART h15plus2 52 118 IPR005818 GO:0000786|GO:0003677|GO:0006334
Gso10g0282 297 Gene3D - 50 129 IPR036388 -
Gso10g0282 297 MobiDBLite consensus disorder prediction 154 168 - -
Gso10g0282 297 CDD H15 52 124 IPR005818 GO:0000786|GO:0003677|GO:0006334
Gso10g0282 297 Pfam linker histone H1 and H5 family 55 121 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0282 Gso-Chr10 2984556 2986016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0282 52 129 Single Myb Histone (SMH) Gene Family AT1G49950 38.750 1.90e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0282 K11275 - gmx:100795994 167.162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1165 2 14580955 14582428 Gso10g0282 10 2984556 2986016 GST