Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0269 ATGGCGAATCACCCTTCCGAAGCTCCCACCGACGACTTCCTGGAGCAAATCCTGGGCCTCTCGACCTTCGCCTCCGCCGACCCCGCCGCCGACGCCTCTCCGATGATGCTTCAGCTCAACTCCGGCGACGCCGCCACCCACCTCGCCGCCTTCCACGCGCCGCCCTACCAGCTCGGCCTCAGCTTGGACCAAGGTAAGGGACCATTCCTCACGCCCGAGGACGCTTCTGGAAGCGGCAAGCGCTTCCGCGACGACGTCGTTGATACCAGACCTAAAAACTTTTTTCATGGACAACCCATGCCTACTACTGTTCCTACTGCTCCACATCCACCAGCAGTGCGACCTAGAGTGCGGGCTAGAAGAGGACAGGCTACAGATCCGCATAGTATAGCTGAAAGGTTGCGCAGAGAGAGAATAGCAGAAAGAATCAGGGCTTTGCAAGAACTGGTCCCTAGTGTCAACAAGACAGATAGAGCTGCCATGCTGGACGAAATTGTGGATTATGTCAAGTTCTTGAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCAGTGGCACCACTGGTAACTGATATCCCATTATCGTCAGTCGAGGAAGAAGGCGGTGAGGGAAGAAACCAGCCAGCCTGGGAGAAGTGGTCAAATGATGGCACAGAAAGACAGGTAGCCAAGCTTATGGAAGAAAATGTGGGTGCTGCCATGCAGTTTCTTCAATCAAAAGCACTCTGCATCATGCCCGTCTCACTAGCTTCAGCAATATACCAGTCACAACCCTCAGGCACTTCTAGTATAGTTAAGCCTGAAACTAATCCTCCTTCATAA 837 0.5352 MANHPSEAPTDDFLEQILGLSTFASADPAADASPMMLQLNSGDAATHLAAFHAPPYQLGLSLDQGKGPFLTPEDASGSGKRFRDDVVDTRPKNFFHGQPMPTTVPTAPHPPAVRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPVSLASAIYQSQPSGTSSIVKPETNPPS* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0269 278 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 267 - -
Gso10g0269 278 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 123 172 IPR011598 GO:0046983
Gso10g0269 278 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 267 - -
Gso10g0269 278 Pfam Helix-loop-helix DNA-binding domain 128 172 IPR011598 GO:0046983
Gso10g0269 278 MobiDBLite consensus disorder prediction 94 113 - -
Gso10g0269 278 Gene3D - 118 180 IPR036638 GO:0046983
Gso10g0269 278 SMART finulus 129 178 IPR011598 GO:0046983
Gso10g0269 278 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 121 182 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0269 Gso-Chr10 2846331 2851108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0269 51 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 80.426 1.57e-117 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gso10g0269 HLH 9.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0269 - - gmx:100793177 484.567