Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0252 ATGGGGAGTGTAGATTATGAGTACCCTTTAGGCATGAACAACGTTGAGAGAGTGCACCAAGTGGAGGTTCCACCACCTCAACCGTTTTTCAAGTCTCTTAAGTACTCTTTGAAGGAGACTTTCTTCCCTGATGACCCTTTGAGGCAGTTCAAGAACAAGCCAGCTTCCAAGAAGTTCATGCTTGGCCTTCAGTACTTCTTCCCCATCTTCGAATGGGCACCCAGATACACCTTTCAGTTCTTCAAAGCTGACCTCATAGCTGGCATCACCATAGCAAGCTTGGCCATTCCTCAGGGCATCAGTTATGCCAAGCTCGCCAACCTCCCTCCAATTCTTGGACTATATTCGAGCTTTATACCACCATTGATTTATGCGATGATGGGTAGCTCGAGGGATTTGGCAGTGGGGACTGTGGCAGTTGGATCGCTTCTGATGGGTTCGATGTTGAGTAATGCGGTTGATCCCAATGAAGACCCAAAGCTTTACCTCCACCTTGCTTTCACAGCTACATTATTTGCTGGTGTTTTTCAGGCTGCCTTGGGTCTGTTTAGGTTGGGGTTAATCGTGGATTTTCTTTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCCACGGTGGTGTGTCTGCAGCAACTAAAATCGATTCTTGGCCTTGTGCATTTCACCCATGGAGCTGATATCATATCAGTGATGCGCTCTGTTTTCACCCAAACTCATGAGTGGAGGTGGGAAAGCGCTGTGTTAGGATTTGTCTTCATTTTCTTCCTCCTAAGCACAAGATACTTCAGCAAAAAACGACCAAGGTTTTTTTGGGTGTCGGCAATGGCGCCATTGACATCTGTTATACTGGGAAGTCTCTTGGTTTATTTCACTCACGCCGAGAAGCACGGTGTTGAAGTGATAGGAGAATTGAAGAAGGGTTTGAATCCACCATCACTGACAAATCTGGTATTTGTGACGCCTTACATGACCACAGCTGTCAAAACAGGCATTGTCGTTGGCATTATATCGCTTGCGGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTATAAAAATTACAACATTGATGGCAACAAAGAGATGATAGCTATTGGGACCATGAACGTAGTTGGTTCTTTCACCTCTTGCTACCTCACAACTGGACCATTTTCGCGTTCAGCTGTGAACTATAACGCTGGATGCAAGACAGCAGCATCCAACATCATAATGTCAATTGCAGTAATGTTGACATTGTTATTCCTAACACCATTGTTCCATTACACTCCCCTGGTGGTGCTATCAGCCATTATTGTATCTGCAATGCTTGGCCTCATAGATTATGAAGCAGCCATCCATCTATTTAAGGTCGACAAATTTGACTTTGTCGTGTGCATGAGTGCATACGTTGGCGTGGTCTTTGGCAGTGTTGAAATTGGCTTAGTCATAGCTATTGCGATATCTGTACTTCGGGTACTTCTATTTATTGCAAGGCCAAGGACATTTGTTTTGGGAAACATTCCAAATTCTGTGATATACAGAAATGTTGAGCACTATCCAAATGCAAAACATGTTCCTGGAATGCTAATTCTAGAGATTGATGCACCAATTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCACAAGATGGATTGATGAAGAGGAAGAAAGAATCAAAGCTACAGGGGAGACTAGTTTGCAGTATGTTATAATTGATATGAGTGCTGTTGGAAACATTGATACAAGTGGAATAAGTATGCTTGAAGAGGTCAAGAAGATTACAGAGAGAAGAGAGCTACAACTTGTTTTGGTCAATCCTGTAAGCGAGGTGATGAAGAAACTGAACAAATCGAAGTTCCAAAATCATTTAGGGGAGAAATGGATCTATCTTACTGTTGAAGAGGCCGTTGGAGCATGCAACTTGAATCTACGTCCAAGCAAAACGAATCCCAAGAAAGATGAATCAGAGGGTTGGAACAATGTTTGA 1974 0.4336 MGSVDYEYPLGMNNVERVHQVEVPPPQPFFKSLKYSLKETFFPDDPLRQFKNKPASKKFMLGLQYFFPIFEWAPRYTFQFFKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLSNAVDPNEDPKLYLHLAFTATLFAGVFQAALGLFRLGLIVDFLSHATIVGFMGGAATVVCLQQLKSILGLVHFTHGADIISVMRSVFTQTHEWRWESAVLGFVFIFFLLSTRYFSKKRPRFFWVSAMAPLTSVILGSLLVYFTHAEKHGVEVIGELKKGLNPPSLTNLVFVTPYMTTAVKTGIVVGIISLAEGIAVGRSFAMYKNYNIDGNKEMIAIGTMNVVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIIMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYEAAIHLFKVDKFDFVVCMSAYVGVVFGSVEIGLVIAIAISVLRVLLFIARPRTFVLGNIPNSVIYRNVEHYPNAKHVPGMLILEIDAPIYFANASYLRERITRWIDEEEERIKATGETSLQYVIIDMSAVGNIDTSGISMLEEVKKITERRELQLVLVNPVSEVMKKLNKSKFQNHLGEKWIYLTVEEAVGACNLNLRPSKTNPKKDESEGWNNV* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0252 657 Pfam Sulfate permease family 81 461 IPR011547 GO:0016021
Gso10g0252 657 Gene3D STAS domain 492 638 IPR036513 -
Gso10g0252 657 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Gso10g0252 657 CDD STAS_SulP_like_sulfate_transporter 513 628 - -
Gso10g0252 657 Pfam STAS domain 513 631 IPR002645 -
Gso10g0252 657 TIGRFAM sulP: sulfate permease 68 631 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso10g0252 657 PANTHER SULFATE TRANSPORTER 2 655 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso10g0252 657 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 655 - -
Gso10g0252 657 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
Gso10g0252 657 SUPERFAMILY SpoIIaa-like 514 635 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0252 Gso-Chr10 2593223 2603583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0252 16 657 Inorganic Solute Cotransporters AT4G02700 66.563 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0252 K17471 - gmx:100810196 1295.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1201 2 14983636 14991785 Gso10g0252 10 2593223 2603583 GST
Gso19g1319 19 41876772 41885749 Gso10g0252 10 2593223 2603583 PCT
Gso3g1320 3 39048795 39057652 Gso10g0252 10 2593223 2603583 PCT
Gso10g0252 10 2593223 2603583 Gso19g1319 19 41876772 41885749 PCT
Gso10g0252 10 2593223 2603583 Gso3g1320 3 39048795 39057652 PCT