Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0239 ATGGCAAGCACAAGAAATCTGAAGCACCTCAACCTGAACCTGAACCTGAACATGTGTTGTTCAAATTCAGCTACTCATGAATGCGAATCTCCTCCATTGAGCCCCATAACTAGTTCCTCAAATCACAATAACACTACTCAATGTCCTTCTCCTTCTTCAATTATGATAAAGAACTTCAACTCTATCTATGACCCTACCTTAACCTCTCATGACCACTCTTTCAGCTCTACCTTCTTCGAGCCCGAACCCGCTGACTTCGCCACCGCCTTCGCCTCCCAACGCTTCTTCTTCTCCTCCCCGGGCCTCTCCAATTCCCTAGTTGAATACAACAACACCAACAAAAGTACTACTCGACACCCAGCATTGTTGAGAGAACATGGTGAGAAGATGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGGTGTTGTTCAAGGGGAGCGTGGCGGTGGCGACGTACTCGCCGGATCCTTACGTGGATTTCCGGCGGTCGATGCAGGAGATGGTGGAGGCGCGGCCGGAGCTGATGGACGTGAAGTCCAATTGGAATGTTCTTCACGAGCTTCTTCTATGCTATCTTGCGCTGAATCCAAAGAGCACACACAAGTTCATTCTTGGAGCCTTCGCTGATCTTCTCGTTAGCCTCATGTCATTCTAG 666 0.4925 MASTRNLKHLNLNLNLNMCCSNSATHECESPPLSPITSSSNHNNTTQCPSPSSIMIKNFNSIYDPTLTSHDHSFSSTFFEPEPADFATAFASQRFFFSSPGLSNSLVEYNNTNKSTTRHPALLREHGEKMKEEEEEEEEEKKKKVLFKGSVAVATYSPDPYVDFRRSMQEMVEARPELMDVKSNWNVLHELLLCYLALNPKSTHKFILGAFADLLVSLMSF* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0239 221 Coils Coil 123 144 - -
Gso10g0239 221 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 12 220 IPR038933 GO:0045892
Gso10g0239 221 Pfam Transcriptional repressor, ovate 157 218 IPR006458 -
Gso10g0239 221 PANTHER TRANSCRIPTION REPRESSOR OFP12 12 220 - -
Gso10g0239 221 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 151 219 IPR006458 -
Gso10g0239 221 ProSiteProfiles OVATE domain profile. 153 217 IPR006458 -
Gso10g0239 221 MobiDBLite consensus disorder prediction 30 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0239 Gso-Chr10 2481152 2482202 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso10g0239 Ovate 2.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0239 - - gmx:102663296 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1212 2 15123192 15124018 Gso10g0239 10 2481152 2482202 GST
Gso19g1308 19 41760641 41761832 Gso10g0239 10 2481152 2482202 PCT
Gso3g1309 3 38937099 38938544 Gso10g0239 10 2481152 2482202 PCT
Gso10g0239 10 2481152 2482202 Gso19g1308 19 41760641 41761832 PCT
Gso10g0239 10 2481152 2482202 Gso3g1309 3 38937099 38938544 PCT