Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0219 ATGACCATCTCAATGTTTATGTGCAGACTAACACAATCCATAATAAACGTTCCTTGTAGTGGGAAAAAACTGAACATGAGGCAAATTGAGAAAGAGAAAATAGTGGTTGTAATGGGAGCCACTGGAGCAGGGAAGTCAAGGCTATCCATTGACCTAGCCACATGTTTTCCATCAGAAATCATAAACTCCGACAAAATCCAAGTCTACGAAGGCCTCGACATAGTTACAAACAAAATCTCCAAGGAAGACCAACGCGGTGTTCCGCACCACTTACTAGGAATAATAAACCCCAACATGGATTTCAGCGCCAACGATTTCTGTGACACGTCATCAGAAATTATTGCCTCAATCACGAGAAGCGAACGCCTTCCAATCATCGTTGGAGGCTCCAACTCGTATCTCGAGGCCCTGATCGATGACGATGATTACAAGTGTCGCTCGCGGTTCGATTTTCTGTGTCTCTGGGTTGACGTGGCAATGCCAGATCTGCAATCCTACGTGGCGGAGCGTGTCGACGACATGTTGTATAACGGAATGGTGGATGAGCTGAGACCGTTTTATAGTCCCAACGGGGATTACTCGCGAGGGGTAAGAAGGGCAATTGGGGTGCCAGAGTTCGACGAGTATTTTCGGAGGGAAGAAGAGGTTGTTGACGAGGAAACGAGGACGAGGTTGTTGGAAGAAGCGGTTAAGGAAATGAAACTGAACACGTGCAAGCTAGCCATGAAACAGTTGGGGAAGATTCGTAGGCTGAGGAACGTTAAGAGATGGGAGATTCATCGATTGGATGCCACGCCCGTGTTTCGGAGGCGTGGTGAAGAAGCGAACGAGGCGTGGAAGAAGCTGGTGGCAGAGCCTAGTGCTATGATCGTTGCTCGCTTTCTCTATAATAGTAACTCCAAAAATAATGCTACTAACGTTGTTTCTGGTTCTGGGCTTCGAGTGAAACCAGCTACTTCATCAGAGACTGTTCTGGCTGCGGCAACGTGCTAG 993 0.4763 MTISMFMCRLTQSIINVPCSGKKLNMRQIEKEKIVVVMGATGAGKSRLSIDLATCFPSEIINSDKIQVYEGLDIVTNKISKEDQRGVPHHLLGIINPNMDFSANDFCDTSSEIIASITRSERLPIIVGGSNSYLEALIDDDDYKCRSRFDFLCLWVDVAMPDLQSYVAERVDDMLYNGMVDELRPFYSPNGDYSRGVRRAIGVPEFDEYFRREEEVVDEETRTRLLEEAVKEMKLNTCKLAMKQLGKIRRLRNVKRWEIHRLDATPVFRRRGEEANEAWKKLVAEPSAMIVARFLYNSNSKNNATNVVSGSGLRVKPATSSETVLAAATC* 331
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0219 330 Gene3D - 31 295 IPR027417 -
Gso10g0219 330 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 141 IPR027417 -
Gso10g0219 330 Pfam IPP transferase 67 140 - -
Gso10g0219 330 Pfam IPP transferase 146 249 - -
Gso10g0219 330 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 160 259 - -
Gso10g0219 330 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 24 305 IPR039657 -
Gso10g0219 330 PANTHER TRNA DIMETHYLALLYLTRANSFERASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 24 305 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso10g0219 Gso-Chr10 2276337 2277717 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0219 147 295 C2H2 Transcription Factor Family AT2G27760 33.143 3.50e-21 92.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0219 K10760 - gmx:100803964 629.017
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1233 2 15328894 15330330 Gso10g0219 10 2276337 2277717 GST
Gso19g1282 19 41394186 41395517 Gso10g0219 10 2276337 2277717 PCT
Gso3g1281 3 38554699 38555941 Gso10g0219 10 2276337 2277717 PCT
Gso10g0219 10 2276337 2277717 Gso19g1282 19 41394186 41395517 PCT
Gso10g0219 10 2276337 2277717 Gso3g1281 3 38554699 38555941 PCT