Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0205 ATGAGTTCCCTCATCCACCTTTTTCTCTTTTTCTTCTTCTTCCTCTGTCTCTCTCACTCTTCTCTATGTGACACGTGTCCCCTGAACTTCACCATCCTGGGCAGAACCAAACCCACATCCTTCGACACCTCCCGCTGCCAGGTCATCAGCCAAGCCCTCCGCCTCGTCCAGTCCGACTACCTCCGCCGCAGCGGCTTCTTCCTCCCTCCCCTCAACGCCTCCGACACATGCTGGACCCACTTCCAGTCCTACGTTAACAACTTCGACCAAACCTACAACATCACCACCTCCTGCGGCTTCAAAACCTCCTGGATCTCCCAAGGCTGCAACAACGTCACCACCAAACAAGACTTCGAATCCTTAGTCCCTCAATCCGCCCTACAAAACATGCGCAACAACTGCAACCAGTCGCTCGAGAACAACTCCCCTTGCGCCCTCTGCACCACTTCGTTCTCCACTCTCCCGCCACTGGGAGACTCCGTCGGAAATCTCACCGACTGCACCAAGTACGCTTCTATCTACGCCGCCGCCTTCGCCAACCGCTTCGGCCCCTCCGACCCCGGCACCGCCAAGTGCTTGTTCTCCCTTCAATTCTCCTCCAACAACAACAACAACTCCTCCTCCTCCTCCAAGAGAAAAAAGGTTGTTATTGCTGTTGTTTCTGTTGTCGGTGTCTTGGTCGTGTTACTGCTTGTTCTCGGGGTTTGGGTTTATTGCAAGCTGGAAGACAAGGTTGCGGGGGACAAGGACGTTCGTGTAGCGGAAATCGGTCTGGTTTCTGGATTGGATTCCATGGAGCAGAGCACTACTTTAATCAGGTTTACTTTTGATGATATTAAGAAAGCAACCAAGAATTTCTCCAGAGATAACATAGTTGGAAGAGGTGGTTACGGGAATGTGTACAAAGGCTTGCTTCCTGATGGAAGCGAGGTTGCGTTTAAGAGGTTCAAGAATTGTTCAGCTTCCGGTGATGCAAGCTTCACTCACGAAGTTGAGGTTATTGCTAGTGTCAGACATGTTAACCTTGTTGCCTTAAGAGGCTATTGTTCTGTTACTACTCGTTTGGAAGGTTACCAGAGGATTATTGTTTGCGATATGGTGAAAAACGGGAGTCTCCATGACCATTTGTTTGGTTCTAATGGTGTGAAATTAAGTTGGCCAATTCGTCAGAAGATTGCTCTAGGCACGGCTAGAGGGTTGGCTTATTTGCATTATGGGGCTCAACCTGCAATCATTCATAGAGATATTAAAGCAAGTAACATACTTTTGGATGATAAGTTTGAAGCTAAAGTTGCGGATTTTGGACTAGCCAAGTTTAACCCTGAGGGGATGACACATATGAGCACAAGGGTGGCTGGAACAATGGGGTATGTTGCTCCTGAATATGCTTTGTATGGACAATTGACAGAGAGAAGCGATGTGTTCAGTTTTGGGGTTGTGCTTCTTGAGCTTTTGAGTGGGAGGAAGGCTCTTCAGATGAACAATGATGGTCAACCCTCTTCTTTGACTGATTGGGCTTGGTCGTTGGTTAGAACGGGGAAGGCCTTGGATGTTATTGAAGATGGCATGCCACAATCGGGTTCAGAACATGTTCTTGAGAAGTATGTGTTGATTGCTGTGCTTTGTTCTCATCCGCAGTTGTATGCTAGGCCAACAATGGATCAGGTTGTTAAAATGATGGAGACTGATGAATCGGTTCCTTCAATACCTGAAAGGCCAATCCCTCTTGTTGCTGGAAGGCTTGATATTGAGAGATCTGTGAGTAGTAGTGGCTCTGGTCAGCTCTCTAGTCCAACGGGTTATCGATCATATACTATAGAAAGTGATCGCCAATCTTCTAATTCTAGGGATGAAAGAAGCTCAAGCTCTAGGATTTTGAGTACAGATTGA 1890 0.4772 MSSLIHLFLFFFFFLCLSHSSLCDTCPLNFTILGRTKPTSFDTSRCQVISQALRLVQSDYLRRSGFFLPPLNASDTCWTHFQSYVNNFDQTYNITTSCGFKTSWISQGCNNVTTKQDFESLVPQSALQNMRNNCNQSLENNSPCALCTTSFSTLPPLGDSVGNLTDCTKYASIYAAAFANRFGPSDPGTAKCLFSLQFSSNNNNNSSSSSKRKKVVIAVVSVVGVLVVLLLVLGVWVYCKLEDKVAGDKDVRVAEIGLVSGLDSMEQSTTLIRFTFDDIKKATKNFSRDNIVGRGGYGNVYKGLLPDGSEVAFKRFKNCSASGDASFTHEVEVIASVRHVNLVALRGYCSVTTRLEGYQRIIVCDMVKNGSLHDHLFGSNGVKLSWPIRQKIALGTARGLAYLHYGAQPAIIHRDIKASNILLDDKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGRKALQMNNDGQPSSLTDWAWSLVRTGKALDVIEDGMPQSGSEHVLEKYVLIAVLCSHPQLYARPTMDQVVKMMETDESVPSIPERPIPLVAGRLDIERSVSSSGSGQLSSPTGYRSYTIESDRQSSNSRDERSSSSRILSTD* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0205 629 Gene3D Phosphorylase Kinase; domain 1 257 365 - -
Gso10g0205 629 ProSitePatterns Protein kinases ATP-binding region signature. 292 314 IPR017441 GO:0005524
Gso10g0205 629 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 7 615 - -
Gso10g0205 629 Pfam Protein kinase domain 287 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0205 629 Pfam SPARK 24 153 IPR043891 -
Gso10g0205 629 SUPERFAMILY Protein kinase-like (PK-like) 262 561 IPR011009 -
Gso10g0205 629 ProSiteProfiles Protein kinase domain profile. 286 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0205 629 MobiDBLite consensus disorder prediction 585 610 - -
Gso10g0205 629 MobiDBLite consensus disorder prediction 585 629 - -
Gso10g0205 629 Gene3D Transferase(Phosphotransferase) domain 1 367 568 - -
Gso10g0205 629 CDD STKc_IRAK 292 561 - -
Gso10g0205 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Gso10g0205 629 PANTHER OS01G0253100 PROTEIN 7 615 IPR045271 GO:0004714|GO:0006468
Gso10g0205 629 SMART serkin_6 286 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0205 Gso-Chr10 2124189 2126974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0205 1 615 Receptor kinase-like Gene Family AT2G48010 61.093 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Gso10g0205 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0205 - - gmx:100800760 1132.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1248 2 15516701 15519112 Gso10g0205 10 2124189 2126974 GST
Gso19g1265 19 41197409 41199588 Gso10g0205 10 2124189 2126974 PCT
Gso3g1263 3 38318133 38323781 Gso10g0205 10 2124189 2126974 PCT
Gso10g0205 10 2124189 2126974 Gso19g1265 19 41197409 41199588 PCT
Gso10g0205 10 2124189 2126974 Gso3g1263 3 38318133 38323781 PCT