Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0204 ATGAAGGAAAAGTTGGATTCCCCAGTTACAGTGCTTGAGGACTATTTCAGGAGCTCAGATTCAGAATCAAGTTCTTCCAAAGAGCCTTCAGCGGATTCTGAGTCTCAAGAGCTTTCAAAACCTGCTTCTAGGTGGCATTCATTTATTCAATTGTTGAGGAGCGGATCGAAGAAACAGATGAACAACACATTGCATCCTCTCAGTGTTCTCAAGCTCTCCAAAAGAATGAGCACTAGCATGAGGGAGTCCATTCTCCCAATTTGTCTCTTAGATGCAACTGCTTCCCCTTGCAGGTCACCTTGGAAGATCTTTACTCATCATGAGATTCAGGTTGCAACCAATTCTTTTAGCCAAGAAAATTTGATTGGGAAGGGTGGTTATGCTGAAGTTTACAAAGGGTGTTTGCCAAATCGTCAATTAGTGGCAATTAAACGTTTAACAAGAGGAACAGCTGATGAAATCATAGGGGATTTCTTATCAGAACTTGGCGTAATGGCGCATGTAAACCATACAAATACTGCTAAGCTGGTTGGTTATGGAGTGGATGGTGGAATGTATCTGGTTCTTGAATTGTCTGAAAAAGGGAGCCTTGCTTCAGTTCTTTATGGTTCGAAGGAAAAACTACCGTGGTGTATTAGACACAAAATTGCATTAGGAACAGCAAAGGGTATATTATATCTTCACGAGGGATGTCAAAGAAGAATTATCCACAGGGATATAAAAGCTGCCAATATATTGCTCACGAAGGACTTTGAACCTCAGATTTGTGATTTCGGGCTAGCAAAATGGCTACCAGAAAATTGGACTCATCACACCGTTTCAAAATTTGAAGGAACTTTCGGTTACCTAGCTCCTGAATACTTGCTGCATGGCATAGTAGACGAGAAAACGGACGTATTTGCATTTGGTGTATTGCTATTAGAATTAGTGAGTGGGCGAAGAGCACTTGATTATTCACAGCAAAGCCTTGTGTTGTGGGCAAAACCATTGCTGAAAAAAAATGATATTATGGAGCTGGTTGATCCTTCACTAGCAGGTGATTTCGACTCTAGGCAAATGAATCTTATGCTCTTGGCTGCTTCACTATGCATACAACAGTCTTCAATTCGTCGTCCCTCTATAAGACAGGTTGTACAGCTTCTGAATGGGAACCTTAGCTGCTTCAAGGGCATGAAGAAAACTCGAATGCCATTCTTCAGAAGAGTGTTCAGGGAAGAACTACATGATTCTGATTAG 1236 0.4134 MKEKLDSPVTVLEDYFRSSDSESSSSKEPSADSESQELSKPASRWHSFIQLLRSGSKKQMNNTLHPLSVLKLSKRMSTSMRESILPICLLDATASPCRSPWKIFTHHEIQVATNSFSQENLIGKGGYAEVYKGCLPNRQLVAIKRLTRGTADEIIGDFLSELGVMAHVNHTNTAKLVGYGVDGGMYLVLELSEKGSLASVLYGSKEKLPWCIRHKIALGTAKGILYLHEGCQRRIIHRDIKAANILLTKDFEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVSGRRALDYSQQSLVLWAKPLLKKNDIMELVDPSLAGDFDSRQMNLMLLAASLCIQQSSIRRPSIRQVVQLLNGNLSCFKGMKKTRMPFFRRVFREELHDSD* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0204 411 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Gso10g0204 411 Gene3D Transferase(Phosphotransferase) domain 1 193 395 - -
Gso10g0204 411 Pfam Protein kinase domain 117 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0204 411 PANTHER OS08G0249100 PROTEIN 1 409 - -
Gso10g0204 411 SUPERFAMILY Protein kinase-like (PK-like) 97 381 IPR011009 -
Gso10g0204 411 ProSiteProfiles Protein kinase domain profile. 116 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0204 411 MobiDBLite consensus disorder prediction 14 41 - -
Gso10g0204 411 MobiDBLite consensus disorder prediction 1 41 - -
Gso10g0204 411 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 409 - -
Gso10g0204 411 Gene3D Phosphorylase Kinase; domain 1 91 190 - -
Gso10g0204 411 SMART serkin_6 116 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0204 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0204 Gso-Chr10 2113654 2117408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0204 103 377 Trihelix Transcription Factor Family AT1G68690 41.958 4.76e-68 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gso10g0204 Pkinase 5.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0204 - - gmx:100780587 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1249 2 15528942 15532897 Gso10g0204 10 2113654 2117408 GST
Gso19g1263 19 41184827 41188306 Gso10g0204 10 2113654 2117408 PCT
Gso3g1262 3 38309949 38313218 Gso10g0204 10 2113654 2117408 PCT
Gso10g0204 10 2113654 2117408 Gso19g1263 19 41184827 41188306 PCT
Gso10g0204 10 2113654 2117408 Gso3g1262 3 38309949 38313218 PCT