Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0200 ATGACTGAAAGTAATAATGAAGTCAACCTCAGTGAATCTAAGAGTGTTGTTCCACTCAACACTTGGGTGCTTATCTCCAATTTCAAGCTGGCTTACAATCTACTAAGGCGTGCTGATGGAACGTTCAATCGAGAGTTAGCGGAATTCCTGGACCGCAAGGTCCCGGCTAATACCATTCCTGTTGACGGGGTATTCTCTTTTGATCATGTCGAACGAAGCACCGGGCTCTTCAATAGGGTGTATCAAGTAGCTCCTGAAAACATGGGAAGGTTCATAGAGTTGGAGAAGCCCTTGAGCACCACAAAGATTGTTCCTGTTATAATTTTCTTCCATGGTGGAAGCTTCTCTCATTCATCTGCGAACAGTGCTATATATGACATCTTCTGCCGCCGCCTTGTAAGCAATTGCAAGGCTGTGGTGGTTTCTGTGAATTACAGGCGATCACCGGAATATCGGTATCCTTGTGCCTATGATGATGGCTGGTCTGCACTTAACTGGGTTAAATCAAGGACATGGCTTCAGAGTGGAAAGGATTCCAAGGTTCATGTGTACTTGGCTGGGGATAGTTCAGGTGGTAACATTGCTCATCATGTTGCTGTGAGGGCTGCTGAGGAAGATATTGAGGTGCTAGGTAATATTCTTCTCCACCCACTGTTTGGTGGGGAGAAACGAACCGAGTCAGAGATGAAACTGGATGGGAAGTACTTTGTGAGGCTGCAGGACCGTGATTGGTATTGGAGAGCTTTTCTTCCCGAAGGGGCGGATCGAGATCACCCGGCTTGTAACCCGTTCGGCCCCAAGGGTAAAAATCTTCAAGGACTCAAGTTGCCCAAAAGTCTTGTTTGTGTGGCTGGTTTGGATCTTCTCCAAGATTGGCAACTGGAATATGTGGAAGGTCTCAAGAATTGTGGCCAAGATGTCAAACTTCTATACCTAAAGGAGGCAACTATTGGTTTCTACTTCTTGCCTAATAATGATCATTTCTATACCCTCATGGAGGAGATAAAGAACTTCGTCAACCCTAACTGTTAA 1032 0.4564 MTESNNEVNLSESKSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVERSTGLFNRVYQVAPENMGRFIELEKPLSTTKIVPVIIFFHGGSFSHSSANSAIYDIFCRRLVSNCKAVVVSVNYRRSPEYRYPCAYDDGWSALNWVKSRTWLQSGKDSKVHVYLAGDSSGGNIAHHVAVRAAEEDIEVLGNILLHPLFGGEKRTESEMKLDGKYFVRLQDRDWYWRAFLPEGADRDHPACNPFGPKGKNLQGLKLPKSLVCVAGLDLLQDWQLEYVEGLKNCGQDVKLLYLKEATIGFYFLPNNDHFYTLMEEIKNFVNPNC* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0200 343 Gene3D alpha/beta hydrolase 1 340 IPR029058 -
Gso10g0200 343 SUPERFAMILY alpha/beta-Hydrolases 100 340 IPR029058 -
Gso10g0200 343 Pfam alpha/beta hydrolase fold 107 320 IPR013094 GO:0016787
Gso10g0200 343 PANTHER ARYLACETAMIDE DEACETYLASE 4 340 - -
Gso10g0200 343 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 107 123 IPR002168 GO:0016787
Gso10g0200 343 PANTHER GIBBERELLIN RECEPTOR GID1B 4 340 - -
Gso10g0200 343 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 183 195 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0200 Gso-Chr10 2085216 2087981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0200 6 340 Carbohydrate Esterase AT3G63010 74.852 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0200 K14493 - gmx:100812133 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1252 2 15560351 15563035 Gso10g0200 10 2085216 2087981 GST
Gso19g1258 19 41136414 41139002 Gso10g0200 10 2085216 2087981 PCT
Gso3g1258 3 38266824 38269433 Gso10g0200 10 2085216 2087981 PCT
Gso10g0200 10 2085216 2087981 Gso19g1258 19 41136414 41139002 PCT
Gso10g0200 10 2085216 2087981 Gso3g1258 3 38266824 38269433 PCT