Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0198 ATGGGGTCGAAACCGTGGCTGTACCCTGCTCCAACCTATCGAACTATAGAAACTGTCTGGGACACCGATGAAGACGCTCCTGGCCCTCGTTGTGGCCACACCCTCACCGCCGTCGCTGCCACCAAGACTCTAGGCCCCCGCTTGATCTTATTCGGCGGCGCCACCGCCATTGAAGGAGGATCTTCCTCCGCTCCCGGCATTCGATTAGCAGGAGTCACGAATACCGTCCATGCCTATGACGTTCAAAGTAGAAAATGGACTAGTATTAAACCCGCCGGAGAACCGCCATCTCCCCGGGCTGCTCATGCCGCTGCTGCAGTTGGAACCATGGTTGTTTTTCAGGGTGGGATAGGTCCGGCGGGGCATTCTACCGATGATCTCTATGTGCTTGACTTGACCAATGATAAATACAAATGGCACAGGGTCGTTGTACAAGGGCAAGGACCTGGTCCACGCTATGGCCATGCAATGGACTTGGTTGCTCAGAGATATCTAGTAACTGTCAGCGGAAATGACGGGAAAAGAGTTGTATCTGATGCTTGGGCTTTGGATACTGCTCAAAAACCTTATGTGTGGCAGAAGCTGAACCCAGAAGGTGACAGACCTTCTGCCAGAATGTACGCAACTGCTAGTGCTCGCTCAGATGGAATGTTTTTACTCTGTGGTGGAAGAGACTCTTCTGGAGCTCCACTAGCAGATGCCTATGGACTGCTCATGCATAGGAATGGCCAGTGGGAATGGACCCTTGCACCGGGAGTTTCCCCTTCACCTAGGTATCAACATGCTGCGGTTTTTGTTGGTGCACGATTACATGTTACAGGAGGTGTTCTCAGGGGTGGACGGTCCGTGGAAGGTGAAGCATCCATTGCAGTATTGGACACTGCTGCTGGGGTTTGGTTGGACAGAAATGGCATTGTGTCCTCCTCACGCTCAAACAAAGGTCATGATTATGACCCTCCTTTGGAGCTTATGCGTCGTTGTCGCCATGCAGCAGCAGCTGTTGGTGTTCATATATTTATCTATGGTGGTCTAAGAGGAGATATACTACTAGATGATTTCCTAGTGGCTGAAAATTCGCCATTGCAGCCTGACATTAATTCTTCTGAGAGAGCTTCACCTGTTACAAGCTCCAAACAAAATCAATCTAACTTGAATTATAATGTAACAGCACCAAATTTGGATGGTGGACCAGATACTCCTTCATTTGGTGGCTCAGGCATGGACAAAAATTCCTTGGAGAAACTGAGGGAAGCATCAGCTGCTGAAGCTGAGGCAGCGAGTGCTGTCTGGCAAGCTGTGCAGTCTATATCAAGTAATCCAGCTGAAGAAACATCTCTGTCAGATGAAAACTCACAAGCTGCAGAAACAGTTTCAGATGGAAGTGACACTGAGGGAGATGTCCGCCTTCATCCTAGAGCCGTTGTAGTTGCCAAGGAGGCTGTAGGTAACCTAGGTGGAATGGTGAGACAATTATCGCTAGATCAATTTGAAAATGAAAGCAGACGCATGATTCCAGTAAATAATGATTTGCCATATCCTACGAAAAAGTTCACCAGGCAGAAATCTCCTCAGGGTTTACATAAAAAGATAATTTCAACTTTGCTTAGGCCTCGCAACTGGAAAGCTCCTGCAAACAGGCGGTTCTTCTTGGATTCTTATGAAGTGGGTGAACTTTGCTATGCTGCCGAGCAAATATTTATGCATGAACCAACCGTTCTTCAGCTTAAAGCTCCTGTCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGATTTCCTTCTACTGCAGGAGACATCACCTATATTGACTACCTGTTTTTGGGAGATTACGTTGATCGAGGACAGCATAGCTTGGAAACCATTACCTTGCTACTTGCTCTTAAGATCGAATATCCTGAGAATGTTCACTTGATACGGGGAAACCACGAAGCTGCTGACATAAATGCACTATTTGGTTTTCGGATTGAGTGCATTGAAAGAATGGGTGAAAATGATGGGATATGGGCATGGACACGATTCAATCAACTATTTAATTATCTTCCATTAGCTGCTCTTATTGAAAAGAAAATTATCTGCATGCATGGTGGCATTGGAAGATCTATCAATTCAGTAGAAGATATAGAGAAGCTCAAAAGGCCCATAACAATGGATGCAGGATCTATTATTTTAATGGACCTTTTATGGTCTGATCCCACAGAGAATGATAGTGTAGAGGGTTTGAGACCAAATGCTAGAGGCCCAGGGCTTGTCACTTTTGGGCCTGATCGTGTCACAGAATTTTGTAAGAAAAATAAATTGCAGCTCATTATAAGGGCCCATGAGTGTGTCATGGATGGTTTTGAACGATTTGCCCAGGGACAATTAATCACCCTTTTTTCTGCAACCAACTATTGTGGAACTGCGAACAATGCGGGAGCTATACTGGTAGTTGGTAGGGGTTTGGTTGTGGTTCCAAAATTAATTCATCCCATACCACCTCCCCTTCAGTCTCCTGAGACATCTCCTGAGCGTGGTATGGATGAGACATGGATGCAGGAGCTCAATATTCAGAGGCCACCAACTCCTACTCGGGGTCGACCACAGCCTGACCTTGATCGTGGCTCACTAGCATACATATGA 2646 0.4633 MGSKPWLYPAPTYRTIETVWDTDEDAPGPRCGHTLTAVAATKTLGPRLILFGGATAIEGGSSSAPGIRLAGVTNTVHAYDVQSRKWTSIKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHAMDLVAQRYLVTVSGNDGKRVVSDAWALDTAQKPYVWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRSVEGEASIAVLDTAAGVWLDRNGIVSSSRSNKGHDYDPPLELMRRCRHAAAAVGVHIFIYGGLRGDILLDDFLVAENSPLQPDINSSERASPVTSSKQNQSNLNYNVTAPNLDGGPDTPSFGGSGMDKNSLEKLREASAAEAEAASAVWQAVQSISSNPAEETSLSDENSQAAETVSDGSDTEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPVNNDLPYPTKKFTRQKSPQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSINSVEDIEKLKRPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPIPPPLQSPETSPERGMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0198 881 Gene3D - 512 843 IPR029052 -
Gso10g0198 881 ProSitePatterns Serine/threonine specific protein phosphatases signature. 647 652 IPR006186 GO:0016787
Gso10g0198 881 Gene3D - 195 381 IPR015915 GO:0005515
Gso10g0198 881 MobiDBLite consensus disorder prediction 834 881 - -
Gso10g0198 881 Pfam Galactose oxidase, central domain 115 157 - -
Gso10g0198 881 Pfam Calcineurin-like phosphoesterase 578 785 IPR004843 GO:0016787
Gso10g0198 881 MobiDBLite consensus disorder prediction 360 409 - -
Gso10g0198 881 PRINTS Serine/threonine phosphatase family signature 578 605 IPR006186 GO:0016787
Gso10g0198 881 PRINTS Serine/threonine phosphatase family signature 613 640 IPR006186 GO:0016787
Gso10g0198 881 PRINTS Serine/threonine phosphatase family signature 646 670 IPR006186 GO:0016787
Gso10g0198 881 PRINTS Serine/threonine phosphatase family signature 684 710 IPR006186 GO:0016787
Gso10g0198 881 PRINTS Serine/threonine phosphatase family signature 714 741 IPR006186 GO:0016787
Gso10g0198 881 PRINTS Serine/threonine phosphatase family signature 774 794 IPR006186 GO:0016787
Gso10g0198 881 PRINTS Serine/threonine phosphatase family signature 796 812 IPR006186 GO:0016787
Gso10g0198 881 SMART pp2a_7 550 834 IPR006186 GO:0016787
Gso10g0198 881 MobiDBLite consensus disorder prediction 434 466 - -
Gso10g0198 881 Pfam Serine-threonine protein phosphatase N-terminal domain 529 576 IPR031675 -
Gso10g0198 881 Pfam Galactose oxidase, central domain 29 96 - -
Gso10g0198 881 MobiDBLite consensus disorder prediction 360 394 - -
Gso10g0198 881 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 881 - -
Gso10g0198 881 Gene3D - 9 194 IPR015915 GO:0005515
Gso10g0198 881 SUPERFAMILY Kelch motif 70 357 IPR015915 GO:0005515
Gso10g0198 881 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 881 - -
Gso10g0198 881 PIRSF STPPP_BSU1 1 881 IPR012391 GO:0004721|GO:0009742
Gso10g0198 881 MobiDBLite consensus disorder prediction 434 459 - -
Gso10g0198 881 CDD MPP_Bsu1_C 530 832 IPR041758 -
Gso10g0198 881 SUPERFAMILY Metallo-dependent phosphatases 531 842 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0198 Gso-Chr10 2053138 2063500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0198 579 777 Calmodulin-binding Proteins AT5G63870 32.609 8.66e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0198 K01090 - gmx:100809465 1743.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1255 2 15587274 15597603 Gso10g0198 10 2053138 2063500 GST