Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0196 ATGAAGATCAGTATTTTGCTATGTGTGGTGCTTTTGGGTTTCCTTGGGGTTTGTCAAGGAGGCAGCCTAAGGAAAAAGTTCTACCGGGATTCCTGCCCTCAAGCCGAGGACATTATTAAGACCAAAACCCAGCAGCATGTGTCTGCTAATCCCGATTTGCCAGCCAAGTTGCTTAGAATGCATTTTCATGATTGTTTTGTCAGGGGTTGTGATGCCTCAGTTTTGTTGAACTCTACTGCCAGTAACACTGCTGAGAGGGATGCAATTCCAAATTTATCCTTGGCTGGCTTTGATGTCATAGATGACATAAAAAGTGCGGTTGAGGCAAAATGTTCCAAAACTGTATCTTGTGCTGACATACTGGCATTGGCAGCTAGGGACGCTGTTTCAGTCCAATTTAATAAACCAATGTGGGAAGTGCTGACGGGTAGAAGAGATGGCACAGTATCGAACAGTAACGAAGCCTTGGCCAATATCCCAGCACCTTTCTTCAACTTCACCCAACTCAAAGAAAGCTTTGCTGGCAAAGGTCTCACTTTGCACGATCTGGTTGTATTATCAGGGGCACACACAATTGGAATAGGGCATTGCAACTTGTTCAGTAACAGGCTTTACAATTTCACCGGGAAAGGTGATCAAGACCCTTCTTTGAACACCACTTATGCTGAATTCTTGAAGACAAAGTGCCAGAGCCTGAGTGACACAACCACAACGGTAGAAATGGATCCTGGAAGCTCTACCAAGTTCGATAGTGACTATTATCCAAACCTTCTCCAGAATAAGGGCCTATTCCAATCAGACGCAGCCCTTCTAACACAAGAGCAATCAGAAGATATAGCTAAAGAATTGGTTGATCAAAACAAGTTCTTCACAGAATTTGCACAGTCAATGAAGAGAATGGGAGCCATTGAGGTCCTCACTGGTTCTGCTGGAGAAATACGGAACAAGTGTTCAGTTGTCAACTCATAA 969 0.4396 MKISILLCVVLLGFLGVCQGGSLRKKFYRDSCPQAEDIIKTKTQQHVSANPDLPAKLLRMHFHDCFVRGCDASVLLNSTASNTAERDAIPNLSLAGFDVIDDIKSAVEAKCSKTVSCADILALAARDAVSVQFNKPMWEVLTGRRDGTVSNSNEALANIPAPFFNFTQLKESFAGKGLTLHDLVVLSGAHTIGIGHCNLFSNRLYNFTGKGDQDPSLNTTYAEFLKTKCQSLSDTTTTVEMDPGSSTKFDSDYYPNLLQNKGLFQSDAALLTQEQSEDIAKELVDQNKFFTEFAQSMKRMGAIEVLTGSAGEIRNKCSVVNS* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0196 322 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 ProSiteProfiles Plant heme peroxidase family profile. 22 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 PANTHER PEROXIDASE 25-RELATED 6 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 Gene3D Peroxidase, domain 2 160 300 - -
Gso10g0196 322 Gene3D - 26 321 - -
Gso10g0196 322 CDD secretory_peroxidase 23 320 IPR033905 GO:0004601|GO:0042744
Gso10g0196 322 SUPERFAMILY Heme-dependent peroxidases 23 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 Pfam Peroxidase 41 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g0196 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Gso10g0196 322 PANTHER PEROXIDASE 6 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0196 Gso-Chr10 2041459 2043427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0196 1 322 Peroxidase AT1G05260 56.000 4.52e-122 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0196 K00430 - gmx:100799691 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1257 2 15605110 15607010 Gso10g0196 10 2041459 2043427 GST
Gso3g1755 3 43364262 43371549 Gso10g0196 10 2041459 2043427 PCT
Gso10g0196 10 2041459 2043427 Gso3g1755 3 43364262 43371549 PCT