Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0177 ATGGATGAGATTCATGTAACAGATCCGAATGCTGAAGTTATTGCTTTATCACCAACCACATTAATGGCAACAAATAGATTCGTCTGTGAGATCTGCAACAAAGGGTTTCAGAGGAACCAAAACCTTCAGTTGCACCGTAGAGGTCGCAATCCTCCATGGAAGCTGAGGCAGAGAGGAAGCAATGAGTTGATGAAGAAAAGGGTTTATGTGTGCCCTGAGCCATCATGTGTCCACCATAACCCAGCTCGTGCATTAGGAGACAGCACTGGCATAAAAAAAATTACAGCAGATAACATGGTGAAAAGAAATGGAAGTGTGACAAATGCTCTAGAAGATATGCTGTCCAATCTGACTGGAAGGCCCACCAGAAAACATGTGGCACTAGGGAATACAAATGTGATTGGGGAACCATATTTTCCAAGGTAG 426 0.4343 MDEIHVTDPNAEVIALSPTTLMATNRFVCEICNKGFQRNQNLQLHRRGRNPPWKLRQRGSNELMKKRVYVCPEPSCVHHNPARALGDSTGIKKITADNMVKRNGSVTNALEDMLSNLTGRPTRKHVALGNTNVIGEPYFPR* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0177 141 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 7 93 - -
Gso10g0177 141 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 7 93 - -
Gso10g0177 141 SUPERFAMILY beta-beta-alpha zinc fingers 27 48 IPR036236 -
Gso10g0177 141 Gene3D Classic Zinc Finger 23 51 - -
Gso10g0177 141 ProSiteProfiles Zinc finger C2H2 type domain profile. 27 47 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0177 Gso-Chr10 1846995 1847695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0177 8 93 IDZ Gene Family AT3G13810 79.070 1.88e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso10g0177 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0177 - - gsj:114371043 295.819