Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0160 ATGAGCGGAGCGAAGGGGAAGAAGAAGGGAGCGAGCTTTGTGATCGATTGCGCGAAGCCGGTGGAGGATAAAATTATGGACATTGCTTCTCTGGAGAAGTTCCTTCAGGAAAGGATTAAGGTTGGCGGCAAGGCCGGTGCACTCGGCGATTCCATTACTGTCACTAGGGACAAGAGCAAGATCACCGTCACCTCTGACAGCAACTTCTCTAAACGGTATCTGAAATATTTGACCAAGAAGTACTTGAAAAAGCACAATGTGAGGGATTGGCTTCGCGTGATTGCATCCAACAAGGAGCGGAGTGTCTATGAATTGAGATACTTCAACATCGCTGAGAACGAGGGTGAAGAGGAAGACTGA 360 0.4833 MSGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITVTRDKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKERSVYELRYFNIAENEGEEED* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0160 119 Pfam Ribosomal L22e protein family 9 117 IPR002671 GO:0003735|GO:0005840|GO:0006412
Gso10g0160 119 Gene3D - 1 119 IPR038526 -
Gso10g0160 119 PANTHER 60S RIBOSOMAL PROTEIN L22 2 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
Gso10g0160 119 PANTHER 60S RIBOSOMAL PROTEIN L22-2-LIKE 2 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0160 Gso-Chr10 1678291 1680340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0160 4 119 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.069 4.15e-63 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0160 K02891 - gmx:100305544 219.164