Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0151 ATGGAAAGCAAAAGAAACTTGTTGTGGGTGATGGGCATATGCATGTGGTTGGTTCTAGCACATCACCGAAGCGGTGCGGCGGAAGAAAAAATAGGCAAGGAGCTAATTAAGAGCATATGCAAAAACAGGGGAAACAATGAATTGTGCATGCAGGTGCTTTCCTCGGACCCAGACAGTGATCACGCGGACCTAGAGGAGCTGGCAATGATATCTCTGAAGGCTGCGGCGTCAAATGCGAGCAGCATTCTAAATGATTGTAAGAGAATGATCGACGACCAGAATTTGGAACCTAAGGTTCAACAGGGTTTGGCTGATTGCAAGGAGAATCTGTTGGACGCAGAGAGTCAAATTCAGGATGCTATTGCGTCCATATTGTCCAATGACAAGCTTGATGCTCAGGTATGGCTCAAGGCTGCATTGGCTGCTATTGATACATGTGACGATTCTATCCCCGGCGATGATGATATTCTCTCTAGAAAGAGTGTGGCGTTTCGCCAATTGTGCAACATTGCCGTCGCCATCAACAAGGCCATGTTGGCCACTCATACCTAA 552 0.471 MESKRNLLWVMGICMWLVLAHHRSGAAEEKIGKELIKSICKNRGNNELCMQVLSSDPDSDHADLEELAMISLKAAASNASSILNDCKRMIDDQNLEPKVQQGLADCKENLLDAESQIQDAIASILSNDKLDAQVWLKAALAAIDTCDDSIPGDDDILSRKSVAFRQLCNIAVAINKAMLATHT* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0151 183 Pfam Plant invertase/pectin methylesterase inhibitor 35 174 IPR006501 GO:0004857
Gso10g0151 183 CDD PMEI-like_1 35 178 - -
Gso10g0151 183 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 176 IPR035513 -
Gso10g0151 183 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 179 IPR035513 -
Gso10g0151 183 PANTHER PECTINESTERASE 1 177 - -
Gso10g0151 183 SMART PMEI_2 31 174 IPR006501 GO:0004857
Gso10g0151 183 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 1 177 - -
Gso10g0151 183 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 178 IPR006501 GO:0004857
Gso10g0151 183 Coils Coil 103 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0151 Gso-Chr10 1609986 1610734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0151 10 156 Carbohydrate Esterase AT5G53370 29.299 1.68e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0151 - - gmx:100791255 363.614