Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0150 ATGGCCAACAACAAGTTAACCTTTGTCATCATCCTCATCTTCCTACCCTCATTGTTAGCTTTGGCTGACATCACTCCCAACACTTCCGTTTCTCCCGGAACCATATGCAAATCCACTCCAGACCCTTCTTATTGCAACTCCGTGCTACCTCCCCAAAACGGCAACGTTTACGAATATGGCAGGTTCTCGGTAAGAAAGTCCCTTTCACAGGCCACCAATTTCTTGAACTTAGTTAACAGATACCTCCAACTCCAACGCCGTTCTTCTCTTTCCACCCCCGCAATCCACGCGCTCGAAGATTGCCAAAGCCTCGCCGAACTCAACATAGACTTTCTCTCCAGTTCCTTAGAAACGGTGAACAGAACAACCAAATTTTTACCCACTTCACAGGCTGACGACATTCAAACTCTTTTAAGTGCCATTCTAACCAACCAACAAACATGCTTGGAAGGCCTTCAAGCCACCGCCTCCGCTTGGCGCCTCAAGAACGGACTCTCCGTTCCGCTCTCCAACGACACTAAGCTATACAGTGTCTCTCTGGCCCTCTTCACAAAGGGGTGGGTCCCAGAAAATGCTAATGTCACCGCGTTTCAGCCAAGCGCCAAACATCGCGGGTTTCGAAACGGGCGTTTGCCGCTCAAGATGTCGAGCAGAGCGCGCGCGATCTACGAGTCGGCGAGTCGGAGAAAGCTCCTGCAGGCGACGGTGGGTGACGAGGTTAAGGTGAAAGACATTGTGACGGTGAGCAAAGATGGAAACGGGAACTTCACCACCATCAGCGACGCCGTGGCCGCGGCGCCGAACAAGACTTCATCCACGGCGGGGTACTTCCTGATCTATGTGACCGCCGGTGTTTACGAGGAAAATGTTTCCATTGATAAGAAAAAGACGTACCTGATGATGGTGGGAGATGGCATCAACAAGACAATTATTACTGGAAATCGCAGTGTTGTTGATGGCTGGACAACCTTTAAGTCAGCGACATTTGCGGTGGTTGGAGCGAGATTCGTGGGTGTGAATATGACCATCCGCAACACTGCCGGAGCAGAGAAGCACCAAGCTGTAGCACTCCGCAACGGCGCAGACTTGTCCACGTTTTACAGCTGCAGCTTCGAAGGGTACCAAGACACACTGTACACTCATTCGCTGCGACAATTCTACAGAGAATGCGACATCTACGGAACCGTCGATTTCATATTCGGAAACGCCGCGGTTGTGTTCCAAAACTGCAACCTCTATCCTCGTCTCCCAATGAGTGGCCAATTCAACTCCATCACCGCACAAGGCCGAACCGACCCTAACCAAAACACCGGCACTTCAATCCACAACTGCACGATTCGACCAGCCGATGATTTGGCAGCGAACATCGATGCCGCTGAAACTTATCTGGGAAGGCCTTGGAAAAATTACTCCAGGACAGTTTACATGCAGAGCTTTATGGACACTGTCATCAATTCTGCTGGGTGGCGCGAATGGGACGGTGATTTTGCTCTGAGCACTCTTTACTATGCAGAGTTTAACAACACTGGACCTGGATCTACCACTGCCAATAGAGTCACGTGGCCGGGTTACCACGTCATTAATGCCACTGTTGCTGCTAATTTTACCGTCGCTAATTTCTTGCTTGGAGATAACTGGCTGCCCCAGACCGGAGTGCCTTACGCCAGTAACTTGATATAG 1680 0.5065 MANNKLTFVIILIFLPSLLALADITPNTSVSPGTICKSTPDPSYCNSVLPPQNGNVYEYGRFSVRKSLSQATNFLNLVNRYLQLQRRSSLSTPAIHALEDCQSLAELNIDFLSSSLETVNRTTKFLPTSQADDIQTLLSAILTNQQTCLEGLQATASAWRLKNGLSVPLSNDTKLYSVSLALFTKGWVPENANVTAFQPSAKHRGFRNGRLPLKMSSRARAIYESASRRKLLQATVGDEVKVKDIVTVSKDGNGNFTTISDAVAAAPNKTSSTAGYFLIYVTAGVYEENVSIDKKKTYLMMVGDGINKTIITGNRSVVDGWTTFKSATFAVVGARFVGVNMTIRNTAGAEKHQAVALRNGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYPRLPMSGQFNSITAQGRTDPNQNTGTSIHNCTIRPADDLAANIDAAETYLGRPWKNYSRTVYMQSFMDTVINSAGWREWDGDFALSTLYYAEFNNTGPGSTTANRVTWPGYHVINATVAANFTVANFLLGDNWLPQTGVPYASNLI* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0150 559 Gene3D - 239 558 IPR012334 -
Gso10g0150 559 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 185 IPR035513 -
Gso10g0150 559 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 24 557 - -
Gso10g0150 559 Pfam Pectinesterase 246 544 IPR000070 GO:0030599|GO:0042545
Gso10g0150 559 Pfam Plant invertase/pectin methylesterase inhibitor 34 182 IPR006501 GO:0004857
Gso10g0150 559 CDD PMEI-like_3 34 187 - -
Gso10g0150 559 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 184 IPR006501 GO:0004857
Gso10g0150 559 ProSitePatterns Pectinesterase signature 2. 392 401 IPR033131 -
Gso10g0150 559 SMART PMEI_2 27 182 IPR006501 GO:0004857
Gso10g0150 559 SUPERFAMILY Pectin lyase-like 243 556 IPR011050 -
Gso10g0150 559 PANTHER PECTINESTERASE 24 557 - -
Gso10g0150 559 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 185 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0150 Gso-Chr10 1603640 1606327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0150 1 559 Carbohydrate Esterase AT4G02330 64.111 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0150 K01051 - gmx:100790729 1111.29