Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0139 ATGGCGGCATTTTCGTTTTCAGTTGCATCTGTGGTGGAAGATGTGCTTCAACAGCACGGTACTCGCCTCAAAGATCTTGACTTGGAATCTAGAAAAGCAGAAGAAGCTGCATCCAGAAGATATGAAGCAGCAGGGTGGCTGAGGAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTGCCAGCAGAGCCATCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATTCTCTGTAATGTTCTTAATAAAGTTCAACCTGGTGCTGTACCCAAGGTCGTGGAGAGTCCTGCTGATTCTGCATTAGTCCCTGATGGAGCACCTTTATCGGCATTTCAGTATTTTGAAAATGTGAGGAACTTTCTGGTGGCTGTGCAGGAAATTGGAGTTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCAGCCAGGATTGTGAACAGCGTCTTGGGTCTTAAGTCCTATAGTGAATGGAAACAGACTGGGGGTAATGGTGTGTGGAAATTTGGTGGAACTATCAAACCCGCAATCTCTTCAAAATCTTTTGTGAGAAAAACCTCTGAGCCATTTACTAATTCCTTGTCAAGGAACTCGTCCATCAATGAAAAATCCATGACTGTTCTTACCTCTGATGTTGAGTCTAATAAAATGGTTGGTAAGCTGTCTGGGTCTCATTCTTTGAGTATGCTTGTTCGTGCAATACTATTAGATAAGAAGCCTGAAGAAGTTCCATTGTTAGTTGAATCAGTCTTGAATAAGGTCGTAGAGGAGTTTGAGCAACGCATTGCCAGCCAGGGTGAACAGATAAAAATTTCTAGAGGTGCTGTGTCCCAAGGCAATGGATCTGTATCAAAGTTTGTTATGGCAGATAAAAAGATGGATAGCAAGATTCCTATGGTAACAAAGAAAGAAGGATTCTTCCATAAAAACCATGTTGATGATGTGGAATCGAAAAGACAACTTCTGAAGCAGCAAATGCTCTTTGATAATCAGCAAAGAGATATTCAAGAACTAAAGCATACAATTCACACCACCAAAGCTGGTATGCAGTTCCTGCAAATGAAGTTTCATGAGGAGTTCTCCAATCTAGGCAGGCATGTTCATAGCTTAGCTCATGCAGCTTCTGGATATCACAAAGTTCTTGAAGAAAATCGCAAACTATACAATCAAGTCCAGGATCTTAAGGGAAGTATAAGGGTGTACTGTCGAGTAAGACCCTTCTTATCTGCACAACCAAATTATTCAAGCACAGTAGATAATATAGAAGATGGAACTATCACAATTAGTATTCCTTCAAAGAATGGGAAAGGGCGTAGATCCTTTAACTTCAACAAAGTCTTTGGACCATCTGCATCCCAAGCGGAGGTCTTCTCTGATATGCAGCCACTCATTAGGTCTGTTCTTGATGGTTACAATGTTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTCACACTATGACTGGACCAAAAGAGATCACAGAGAAAAGCAGAGGTGTAAACTACAGGGCTCTAAGTGATTTGTTTCTTACAGCAGATCAAAGAAGAGGCACTTTTTGCTATGATGTGTCTGTTCAAATGATTGAGATTTATAATGAGCAAGTCAGAGATCTATTGGTTACTGATGGATCAAACAAAAGATTAGAAATTCGTAGTAATTCTCATAGAGGGCTCAGCGTACCAGATGCATGCCAAGTCCCAGTTTCATCAACAAAAGATGTTATTGAACTAATGAACCTGGGCCAAAGGAATCGTGCAGTTGGAGCAACAGCCCTTAATGACCGTAGTAGTCGATCACACAGTTGCTTGACTGTTCACGTTCAAGGAAGAGACTTGACTTCTGGAACTATCCTACGTGGATGCATGCATTTGGTTGACTTGGCAGGAAGTGAGAGAGTTGACAAATCTGAGGCCACAGGAGATAGACTGAAAGAAGCACAGCACATTAACAGATCTCTTTCAGCTTTGGGTGATGTCATTGCTTCCCTTGCTCAGAAAAACCAACATGTCCCATACAGAAATAGCAAACTCACACAGTTACTTCAAGATTCACTTGGAGGACAGGCCAAGACACTAATGTTTGTTCACATAAGTCCAGAGGTTGATGCTATTGGAGAAACAATTAGCACCTTAAAATTTGCAGAAAGAGTTGCTACAGTTGAACTTGGTGCTGCTCGAGTGAACAAGGATGGGGCAGCAGATGTCAAAGAGCTCAAAGAACAGATAGCCAGCCTCAAAGCAGCATTGGCAAGAAAGGAAGGTGAATCAGAACATTCTTTATCAGGTAGCTCTGAAAAATATAGGACAAGGGCTGGTGAGGTATCACCTTATCATGCAAACCAACGGGGTGCTGATATTGTGAGCCTAGGGTGCCGGCAACCAATGCTTGATGTAGGCAATATAGAGCTTCACAGTAATACCCCATTGAGACAAAAAACTCAGAGCTATGATTTTGATGAGATGTCGACGAATTCACCACCCTGGCCCCCATTGAATAATCTTGGACTAAACTATGGGGATGATGACAGAGAAACTGGTTCAGGAGAGTGGGTTGATAAAGTCATGGTAAACAAGCTAGATGCTACAAACAAAACTGAGAACATCTTAGGGTGTTGGGAAGCAGACAGTGGGAACTTATCTGAGGTATTTTATCAGAAGTATCTCCAAGATCCTTCCAAAATGGACCCAGAAAGATCCCACAACATGTTCATGGGAGGCAACAACCAGTTTAACGTTGCTGGTTCAGATGACATGGATGATCTTGATGATACAACCACTGATTCCTCGGAACCTGACTTGCTTTGGCAATTTAATCATTCCAAACTTGCCAGCATAGCCAATGGCAATGGTTCAAAGGCTAGGAGACCTGTCTCAAAGCCAACAAATAGCCCAATATTGAGCAAGAATAATGTTCATTCTTCTCTTGGTCCTTCACCTTCAAGGAAACAACAATCAAACGGTGTCAATCGAACAGCAAGACATCCAGCTCCAGTTGACATGAAACGTAAAACTGGGAGTAGAAAGTAA 3039 0.4202 MAAFSFSVASVVEDVLQQHGTRLKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVPKVVESPADSALVPDGAPLSAFQYFENVRNFLVAVQEIGVPTFEASDLEQGGKSARIVNSVLGLKSYSEWKQTGGNGVWKFGGTIKPAISSKSFVRKTSEPFTNSLSRNSSINEKSMTVLTSDVESNKMVGKLSGSHSLSMLVRAILLDKKPEEVPLLVESVLNKVVEEFEQRIASQGEQIKISRGAVSQGNGSVSKFVMADKKMDSKIPMVTKKEGFFHKNHVDDVESKRQLLKQQMLFDNQQRDIQELKHTIHTTKAGMQFLQMKFHEEFSNLGRHVHSLAHAASGYHKVLEENRKLYNQVQDLKGSIRVYCRVRPFLSAQPNYSSTVDNIEDGTITISIPSKNGKGRRSFNFNKVFGPSASQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTHTMTGPKEITEKSRGVNYRALSDLFLTADQRRGTFCYDVSVQMIEIYNEQVRDLLVTDGSNKRLEIRSNSHRGLSVPDACQVPVSSTKDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGTILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINRSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEVDAIGETISTLKFAERVATVELGAARVNKDGAADVKELKEQIASLKAALARKEGESEHSLSGSSEKYRTRAGEVSPYHANQRGADIVSLGCRQPMLDVGNIELHSNTPLRQKTQSYDFDEMSTNSPPWPPLNNLGLNYGDDDRETGSGEWVDKVMVNKLDATNKTENILGCWEADSGNLSEVFYQKYLQDPSKMDPERSHNMFMGGNNQFNVAGSDDMDDLDDTTTDSSEPDLLWQFNHSKLASIANGNGSKARRPVSKPTNSPILSKNNVHSSLGPSPSRKQQSNGVNRTARHPAPVDMKRKTGSRK* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0139 1012 Coils Coil 732 759 - -
Gso10g0139 1012 Pfam Calponin homology (CH) domain 38 158 IPR001715 GO:0005515
Gso10g0139 1012 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1009 - -
Gso10g0139 1012 Pfam Kinesin motor domain 405 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g0139 1012 Gene3D Kinesin motor domain 341 726 IPR036961 -
Gso10g0139 1012 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 757 IPR027417 -
Gso10g0139 1012 Coils Coil 16 36 - -
Gso10g0139 1012 SMART ch_5 39 157 IPR001715 GO:0005515
Gso10g0139 1012 CDD KISc_C_terminal 397 726 - -
Gso10g0139 1012 PRINTS Kinesin heavy chain signature 472 493 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g0139 1012 PRINTS Kinesin heavy chain signature 594 611 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g0139 1012 PRINTS Kinesin heavy chain signature 625 643 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g0139 1012 PRINTS Kinesin heavy chain signature 674 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g0139 1012 MobiDBLite consensus disorder prediction 950 1012 - -
Gso10g0139 1012 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 1009 - -
Gso10g0139 1012 ProSiteProfiles Kinesin motor domain profile. 399 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g0139 1012 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Gso10g0139 1012 MobiDBLite consensus disorder prediction 958 995 - -
Gso10g0139 1012 SMART kinesin_4 397 732 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g0139 1012 Gene3D - 24 185 IPR036872 -
Gso10g0139 1012 SUPERFAMILY Calponin-homology domain, CH-domain 35 170 IPR036872 -
Gso10g0139 1012 MobiDBLite consensus disorder prediction 909 935 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0139 Gso-Chr10 1475022 1481390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0139 387 724 Calmodulin-binding Proteins AT5G65930 43.353 1.73e-77 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0139 K10406 - gmx:100788073 1939.47