Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0116 ATGGCTTCGATTCCGCGTCCGGCGAGTTCGGGATCTTCGGAGGGAGGAGGAGATCCGGCTGCGATGGACGAGAGAAAGAGGAAGCGGATGGAGTCGAACCGCGAGTCCGCACGGCGATCGCGGATGAAGAAGCAGAAGCTGCTCGAAGACCTATCCGACGTAGCGAGTCGCCTTCAAGGCGAGAACGTGCGCTTAGCGCAGAGCATAAAGGCGAAGGAGGAAGCGTACGTTGAGATCGAAGCCGCGAACGACATCCTCAGAGCACAGACCATGGAACTCGCCGACCGGTTAAGGTTTCTGAACTCCATTCTCGAGATCGCCGATGAGGTCGGCGGCGGTGGTGAATCCTTCGAGATTCCGCAGATTCCAGACCCTCTCTTCATGCCCTGGCAGATCCCCCACCCTATGATGGCGTCACCTGACATGCTCCTCCATGGAAATCAAGGCCTGTTTGCTTGA 459 0.5795 MASIPRPASSGSSEGGGDPAAMDERKRKRMESNRESARRSRMKKQKLLEDLSDVASRLQGENVRLAQSIKAKEEAYVEIEAANDILRAQTMELADRLRFLNSILEIADEVGGGGESFEIPQIPDPLFMPWQIPHPMMASPDMLLHGNQGLFA* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0116 152 Coils Coil 69 89 - -
Gso10g0116 152 SUPERFAMILY Leucine zipper domain 25 75 IPR046347 GO:0003700|GO:0006355
Gso10g0116 152 CDD bZIP_plant_GBF1 26 76 IPR045314 GO:0003700|GO:0006355
Gso10g0116 152 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
Gso10g0116 152 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 142 - -
Gso10g0116 152 Pfam bZIP transcription factor 25 76 IPR004827 GO:0003700|GO:0006355
Gso10g0116 152 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 70 IPR004827 GO:0003700|GO:0006355
Gso10g0116 152 MobiDBLite consensus disorder prediction 19 45 - -
Gso10g0116 152 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Gso10g0116 152 Gene3D - 23 78 - -
Gso10g0116 152 MobiDBLite consensus disorder prediction 1 45 - -
Gso10g0116 152 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0116 Gso-Chr10 1226536 1227684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0116 12 143 bZIP Transcription Factor Family AT3G62420 47.826 1.08e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso10g0116 bZIP_1 4.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0116 K25786 - gmx:778130 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0110 2 1130396 1131606 Gso10g0116 10 1226536 1227684 GST
Gso19g1819 19 46932277 46933490 Gso10g0116 10 1226536 1227684 PCT
Gso3g1854 3 44149446 44150597 Gso10g0116 10 1226536 1227684 PCT
Gso10g0116 10 1226536 1227684 Gso19g1819 19 46932277 46933490 PCT
Gso10g0116 10 1226536 1227684 Gso3g1854 3 44149446 44150597 PCT