Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0112 ATGGTGTCCAAACCTACCGACTCTGCTTCCAAACCTCGAAAACAACATGGAGAGCCAGCAAATGATGCAATTGGAAACTTGTCCCTCAAGATAAATCAGTTGAAAAAGCAAATCCAGGCGGAGAGAATATTGTACATTAAAGAAAAAATTCAGAGCAATGAGAAGAAGCTACAATTTCATATGTCAGGAGTCCTGTCAGAAATATCAACAAGGGGATCTTCACCGCCAGAGGAAAATAGGAAAACTCCAATTCTTTCTTCAAGAATTGACCATCCTTTATGTAAATTCAGTGGTTTCTCTCCAGTCTCAGGAGACAAAGACCACAGCAATCAAGATGCATTATCTGCTACAAGTATCAAAATTCCATATATTGAAACATTACCGCCATATACCTCTTGGATATTTCTAGACAGAAATCAGAGGATGGCAGAAGATCAGTCAGTGGTTGGAAGAAGACGTATATACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAGGAGTTAACAGGACCCGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGTGTTATATGGATGGCATTTGAGGAATATGGGTTAAACGACGAGGTACTGAATATTGTTAGCGAATTTGTTGGGGGCACCAGTTTAGAAATTCAGGAGAGGTACAAAACTATCAAGGAAAAGAACATTGGCAGGTTGGACCAGCCTTCTGAAAACTCAGGAGAATATGAATCTATTATTGGCATATGTCCAGAGAAAAGCCTGAGTGCCGCATTAGATTCATTTGATAATCTTTTTTGTCGCCGTTGCCTGCAGATTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCTTTAATATATCCTAGTGAAAAGCAGACAGTTTGGTCTGATCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGCAGTTAAAGGTAGTAAAAAATGTGACAGAAGATTCAACTTCTGGGTCTGATCAGAATAAGAGAACTACAATTACAGAAGAGGCAGATGTGAAATTGGCTCCCTCCATTATAGAGGAACCTAGTAATCAGAGTATAGCACCTTTTCCAACAGAAGTTGATTGTCTTGGATCTCTTAATTTAAATGTTCCTATCTCAGTGAGTGTGGAAAAATGGAAAGTCCCAAATCAGTCAGACACAGCACTCCGTGACTCATCACTCCCTCCTGATGATTCTCAGCATTCTTATAAAAAGCTGAAGACAATATCTGATGATGTAGTTACTGCAAATAGTGATTCTAGCAAGAACATAAATTTTGGTGCATGTGATGAAAGTATACATACAATTACTAGTGGACTTTTGGACAAATCTGTTAAAGATAATTCAAATAAATTAATAGATTCTTCTAGCACTTGCTGTAGTGATGAGCAGGACAAAAGTATTGGGGATGGACCAAAAGATCCTACAAATAAGACAGAATTTAAGAAGTTGTCCAATTCAATGGAAGGGAAAGTTGATGGGATGCTAAGGGTTTCAGATTGGAAACCTCTGGAAAAAGAATTATACTTAAAGGGAGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCAAGGAACTTACTTTCTGGCCTGAAGACTTGTATGGAAATATCTAGTTACATGCATTCTGGAGGAGTGTCAATGCCCCATGGATCTATTGTTGCTCCTAGTTCAATCATGGAAGACAAGGGAAAATTTGATGCAGAGTGCACAGACCAGGAGATGCCATCTAGGTCACGGTTGCTGAGGAAAAGGGGTAAAACAAGGAAATTTAAATATTCTTGGAAATCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGTCAATGTGTGGAAAGGAATGTACTTGTGTTAATGGTGGAACTTGCTGTGAGAAATATTGCGGTTGTTCTAAAAGCTGCAAAAATCGGTTTAGAGGATGCCATTGTGCCAAGAGTCAGTGTAGAAGTCGACAATGCCCATGCTTTGCTGCAGGACGGGAATGTGACCCAGATGTCTGTCGGAATTGCTGGGTTAGTTGTGGGGATGGTTCATTAGGGGAGCCACCTCGACGTGGAGAAGGGCAATGTGGAAATATGAGGCTTCTATTAAGACAACAACAGAGGATTCTCTTGTCAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTGAAGAACCCAGTAAACAAAAATGATTACTTAGGAGAGTACACAGGAGAACTGATCTCCCACCGAGAAGCAGATAAACGTGGGAAAATATATGATCGTGCCAACTCGTCTTTCCTTTTTGACTTGAATGATCAGTATGTTCTTGATGCTTATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCGTCAAACCCCAATTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTTGCCAAGGAACACATCGATGCTAGTGAGGAGCTCTTCTATGATTACCGTTATGGTCCAGATCAAGCACCACCATGGGCACGTAAACCTGAGGGTTCCAAGAGAGACGAATCAACAGCTTCTCAAGGCAGAGCTAAGAAACACCAGTCTCATTGA 2616 0.4098 MVSKPTDSASKPRKQHGEPANDAIGNLSLKINQLKKQIQAERILYIKEKIQSNEKKLQFHMSGVLSEISTRGSSPPEENRKTPILSSRIDHPLCKFSGFSPVSGDKDHSNQDALSATSIKIPYIETLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTGPEEEKHEFSEAEDRVIWMAFEEYGLNDEVLNIVSEFVGGTSLEIQERYKTIKEKNIGRLDQPSENSGEYESIIGICPEKSLSAALDSFDNLFCRRCLQIFDCRLHGCSQPLIYPSEKQTVWSDPEGDRKPCSDQCYLQQLKVVKNVTEDSTSGSDQNKRTTITEEADVKLAPSIIEEPSNQSIAPFPTEVDCLGSLNLNVPISVSVEKWKVPNQSDTALRDSSLPPDDSQHSYKKLKTISDDVVTANSDSSKNINFGACDESIHTITSGLLDKSVKDNSNKLIDSSSTCCSDEQDKSIGDGPKDPTNKTEFKKLSNSMEGKVDGMLRVSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEISSYMHSGGVSMPHGSIVAPSSIMEDKGKFDAECTDQEMPSRSRLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKECTCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLSKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESTASQGRAKKHQSH* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0112 871 SMART set_7 722 843 IPR001214 GO:0005515
Gso10g0112 871 MobiDBLite consensus disorder prediction 471 485 - -
Gso10g0112 871 SUPERFAMILY SET domain 623 840 IPR046341 -
Gso10g0112 871 MobiDBLite consensus disorder prediction 848 864 - -
Gso10g0112 871 Gene3D SET domain 623 839 IPR046341 -
Gso10g0112 871 CDD SET_EZH 722 838 - -
Gso10g0112 871 Pfam SET domain 733 836 IPR001214 GO:0005515
Gso10g0112 871 MobiDBLite consensus disorder prediction 460 485 - -
Gso10g0112 871 MobiDBLite consensus disorder prediction 843 871 - -
Gso10g0112 871 Pfam CXC domain 661 692 IPR041355 -
Gso10g0112 871 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 871 IPR025778 GO:0031519
Gso10g0112 871 MobiDBLite consensus disorder prediction 1 24 - -
Gso10g0112 871 SMART CXC_2 657 694 IPR033467 -
Gso10g0112 871 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 14 869 - -
Gso10g0112 871 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 14 869 IPR045318 GO:0006338|GO:0018024
Gso10g0112 871 SMART sant 502 552 IPR001005 -
Gso10g0112 871 SMART sant 179 229 IPR001005 -
Gso10g0112 871 ProSiteProfiles CXC domain profile. 609 708 IPR026489 -
Gso10g0112 871 ProSiteProfiles SET domain profile. 722 837 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0112 Gso-Chr10 1190709 1200722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0112 711 840 C2H2 Transcription Factor Family AT2G23740 26.531 2.89e-09 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso10g0112 SET 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0112 - - gmx:100808730 1781.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0105 2 1099460 1108776 Gso10g0112 10 1190709 1200722 GST
Gso19g1823 19 46958383 46965076 Gso10g0112 10 1190709 1200722 PCT
Gso3g1859 3 44175306 44182973 Gso10g0112 10 1190709 1200722 PCT
Gso10g0112 10 1190709 1200722 Gso19g1823 19 46958383 46965076 PCT
Gso10g0112 10 1190709 1200722 Gso3g1859 3 44175306 44182973 PCT