Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0104 ATGTCGCTGCTCGCCGCTTCCACCTCTTTATCTGGTGGATTGAAATGGTGGCTTGTGTTGTTATCTTGCATGGTTTGGTTTGTGGTTGATTATGGTGTGTGTGGAAGAGCACTGCAGCTGGAAGCACCACCTTCTTTGTCTCCTGCTGCAGCACCTGTTGTTGCTGTTGATGATCTGCCACTGCCGGTAAATGCTCATGGGTTGAAGCATTTGCCTGCACCGTTTCCGTCACGCGCCAATTTCACCAAAGGGAGAGGAGAATTACAACATCCTCCGGTTTCTGGGTTTAAGAATATTGCCCCTATGCATCCCATTGCTGATGCTATTCCTTCTGCTCTCGCTCAGCCACCATTGTCCCCTTATGTTTCCGATTGTTGCAAACAAGACATGGTGTGGAAACGTGGCAGTGAGGTTTGCCACTGTGCTTATCCCATAAAGATAGACCTGCTTCTTTTGAATGTCTCTCAAAACTCCAACTGGAATGCTTTTCTCAATGGTTTGGCCACCCAACTTGAGCTGCAGACTACACAAATTGAAATTATTAAATTTTATCTACTCAGCTTATCAACATTGAATATATCGGTGGATATCACTCCACATAAAGGGGTCAGTTTCTCGGCTGAGGAAGCAGCTAAAATAAACTCATCGCTTTTACTGCATAAGGTTCAACTAGACCGCAGATTCGTGGGTGACTACAAAGTAATCAATGTAACCTGGTTTAAACCTTCACCTCCTTCTCCGGCTCCTACAATTGCTACATCACCAACGAAAGCTCCCAAGAGACGAGCACCTACAACTACATTATCGAGTACTTCAGACGGGGGAAGGCATTCAAACTTGCTTATTATTCTTGGAATTGTCACTGGCGTACTCTTCATTTCCATTGTATGTGTACTTATACTTTGCTTATGCACAATGAGGCCAAAAACAAAAACACCTCCCACAGAAACTGAAAATTCAAGGATTGAAAGTGCAGTTCCTGCTGTTGGGTCTCTTCCCCACCCAACCAGTACCCGCTTTATTGCTTACGAAGAACTTAAAGAAGCAACAAATAATTTTGAACCAGCAAGTGTACTTGGAGAAGGAGGTTTTGGTAGAGTTTTTAAAGGTGTCTTAAATGATGGAACTGCTGTTGCAATTAAGAGACTTACCAGTGGAGGGCAACAAGGTGATAAAGAATTTTTAGTTGAGGTTGAGATGCTTAGTCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTATAGCAATCGCGACTCATCACAAAATCTACTTTGCTATGAGCTTGTCGCAAATGGAAGCTTGGAGGCCTGGCTTCATGGTCCCCTGGGAATAAATTGCCCCTTGGATTGGGACACTAGAATGAAGATCGCCCTTGATGCTGCAAGAGGACTTGCATACCTGCATGAAGATTCACAGCCCTGTGTTATACACAGAGATTTCAAGGCATCAAACATATTGCTTGAAAACAACTTTCATGCTAAAGTTGCAGATTTCGGTCTAGCTAAACAGGCACCCGAAGGCAGGGCTAATTATCTATCTACTAGAGTCATGGGAACATTTGGGTATGTAGCGCCCGAGTATGCCATGACCGGACACCTACTTGTTAAAAGCGACGTTTATAGCTACGGGGTTGTCTTGCTGGAACTGTTGACCGGAAGGAAACCAGTGGATATGTCACAGCCATCTGGACAAGAAAACCTTGTTACTTGGGCAAGGCCAATTCTTAGAGATAAGGACCGGTTGGAAGAACTTGCCGATCCAAGGCTTGGGGGAAGGTACCCAAAGGAAGATTTTGTACGTGTTTGCACAATTGCTGCAGCCTGTGTTGCTCCTGAAGCAAGCCAACGACCTACAATGGGTGAAGTGGTACAATCACTTAAAATGGTGCAGCGGATCACAGAATCTCATGATCCTGTGTTAGCCTCATCCAATACACGGCCCAACCTGAGACAGTCCTCTACCACTTACGAGTCTGATGGGACGTCTTCAATGTTTTCTTCAGGTCCTTACTCTGGTCTAAGTACCTTTGACTATGACAACATTTCGAGAACAGCTGTTTTCTCTGAAGATCTTCATGAAGGACGATGA 2094 0.4465 MSLLAASTSLSGGLKWWLVLLSCMVWFVVDYGVCGRALQLEAPPSLSPAAAPVVAVDDLPLPVNAHGLKHLPAPFPSRANFTKGRGELQHPPVSGFKNIAPMHPIADAIPSALAQPPLSPYVSDCCKQDMVWKRGSEVCHCAYPIKIDLLLLNVSQNSNWNAFLNGLATQLELQTTQIEIIKFYLLSLSTLNISVDITPHKGVSFSAEEAAKINSSLLLHKVQLDRRFVGDYKVINVTWFKPSPPSPAPTIATSPTKAPKRRAPTTTLSSTSDGGRHSNLLIILGIVTGVLFISIVCVLILCLCTMRPKTKTPPTETENSRIESAVPAVGSLPHPTSTRFIAYEELKEATNNFEPASVLGEGGFGRVFKGVLNDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVANGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGRYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRITESHDPVLASSNTRPNLRQSSTTYESDGTSSMFSSGPYSGLSTFDYDNISRTAVFSEDLHEGR* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0104 697 Gene3D Transferase(Phosphotransferase) domain 1 431 647 - -
Gso10g0104 697 MobiDBLite consensus disorder prediction 245 273 - -
Gso10g0104 697 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 76 697 - -
Gso10g0104 697 ProSiteProfiles Protein kinase domain profile. 353 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0104 697 MobiDBLite consensus disorder prediction 637 666 - -
Gso10g0104 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Gso10g0104 697 Gene3D Phosphorylase Kinase; domain 1 334 430 - -
Gso10g0104 697 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Gso10g0104 697 Pfam Protein tyrosine and serine/threonine kinase 357 628 IPR001245 GO:0004672|GO:0006468
Gso10g0104 697 SUPERFAMILY Protein kinase-like (PK-like) 329 630 IPR011009 -
Gso10g0104 697 MobiDBLite consensus disorder prediction 259 273 - -
Gso10g0104 697 CDD STKc_IRAK 359 629 - -
Gso10g0104 697 PANTHER OS01G0750732 PROTEIN 76 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0104 Gso-Chr10 1120582 1127688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0104 18 697 Receptor kinase-like Gene Family AT4G02010 65.674 0.0 922
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gso10g0104 PK_Tyr_Ser-Thr 2.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0104 - - gmx:100792818 1248.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0100 2 1063646 1071803 Gso10g0104 10 1120582 1127688 GST
Gso19g1828 19 47002556 47009229 Gso10g0104 10 1120582 1127688 PCT
Gso3g1866 3 44216653 44224398 Gso10g0104 10 1120582 1127688 PCT
Gso10g0104 10 1120582 1127688 Gso19g1828 19 47002556 47009229 PCT
Gso10g0104 10 1120582 1127688 Gso3g1866 3 44216653 44224398 PCT